Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g00303 ATGAGTGGGTCCTCGGCACTTCCTCAATCTGTTATGCAAGAATGGGAAGCCATCACCGGGCATCGTTTATTGGAACGATATGGCATGACTGAATTTGTCATGGCATTGTCAAATCCATTGAAAGGTGAGCGTAAGGCGGGCACAGTTGGAAAACCATTGCCTGGTGTGCAGGTGAAGATTCTTCAAGATGGGGAGAGTTGGAGTGAAAAAACTGGAGTCAGCGGCGAGCTTTGCGTTAAAAGCCCTTCACTGTTTAAAGAATATTGGAAACTTCCAGAGGTAACGAAGGAATCATTTACGGAAGAAGGATTCTTTAAGACCGGAGATGCTGTTACAACAGATAAAGATGGATATTACATCATTCTAGGACGTACTAATGTGGATATCATCAAGGCCGGTGGCTATAAGCTGTCTGCATTAGAAATCGAATCAGTTATAATAGAGGCAAGTTGCTATCATTTTCTCATCCTACGAACCTTTTTGCAGCATCCCGCTGTCTCAGAATGTTGTGTCTTGGGCTTACCACACAAAGAATATGGAGAAATTGTCGGTGCAATTATCGTGCCAGAGGCAAATGTTAAACGAAAGCGGGATGAAGAGTCAAATCCTGCTCTAAGCCTTGAAGAATTATCCACCTGGGCCAAAGATAAACTTGCACCTTACAAGGTAAGTAAAAAAGAGCTGAAGAAGATGCTAGCTTCGGAACAGTAA 711 0.4318 MSGSSALPQSVMQEWEAITGHRLLERYGMTEFVMALSNPLKGERKAGTVGKPLPGVQVKILQDGESWSEKTGVSGELCVKSPSLFKEYWKLPEVTKESFTEEGFFKTGDAVTTDKDGYYIILGRTNVDIIKAGGYKLSALEIESVIIEASCYHFLILRTFLQHPAVSECCVLGLPHKEYGEIVGAIIVPEANVKRKRDEESNPALSLEELSTWAKDKLAPYKVSKKELKKMLASEQ 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g00303 236 SUPERFAMILY Acetyl-CoA synthetase-like 1 225 - -
Tsu06g00303 236 PANTHER ACYL-COA SYNTHETASE 1 226 - -
Tsu06g00303 236 PANTHER MALONATE--COA LIGASE-LIKE 1 226 - -
Tsu06g00303 236 Gene3D - 130 226 IPR045851 -
Tsu06g00303 236 Pfam AMP-binding enzyme C-terminal domain 161 226 IPR025110 -
Tsu06g00303 236 Gene3D - 1 124 IPR042099 -
Tsu06g00303 236 Pfam AMP-binding enzyme 2 126 IPR000873 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g00303 Tsu-Chr6 2480578 2483905 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu06g00303 2 222 Monolignol Biosynthesis Gene Families AT4G05160 25.446 2.65e-20 87.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g00303 K18660 - ahf:112778583 364.385
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu06g00303 06 2480578 2483905 Tsu06g00303 06 2480578 2483905 ECH