Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Tsu06g00286 | ATGGTGCCACCATTGATACTACCCAAATTAACTCTTCTAATCCTTGTTTTCTGCATTTTAATCTCTTTCGatcaacacaaacacaacaacaacatcaccaataacaacaacaacaacaccttcAATTTCATCAACACCATTTCATTTCCAATACATTCTTTTTCTAGTGGCCCAGTTTCTTTATCTGTCACCAACAATCATTATTCAGATTCTTCTTTTTCCGGTTCTAATTCTCAATCTCTTCTTGAATATGATTTTTACCGTAATTCTTGTCCGAATGCTGAACGTATTGTTCGTTCTACGGTTCATCGGCTTTACAGAACTAATCATACTTTGATTCCTGCTCTTATTCGTCTTGCTTTTCATGATTGCTTCATTCAGGGATGTGATGCTTCTATTTTGTTAGAAGATGATGATTACATTGATTCAGAGAAAGAGTCACCTCCCAATGGAAGTCTCAAAGGATTTGATGTAATAGAGATCATTAAATCTAAGCTTGAAGAAGCATGTCCTGGAGTTGTTTCTTGTGCTGATATTCTTGTGCTGGCTGCAAGAGATTCTGTTGCTTTGGTTGGTGGTCCATTCTATCCATTATATACAGGCAGGAGGGATGGTTCTAACTCTTTTGCAGACATTGCAACAGATGAGCTTCCTTCACCCTATGCTGATTTATCTCAAATGCTTTTATCCTTCAAATTAAGGGGATTTGATGAAAGAGAAATGGTCACTCTCTTAGGTGCCCACAACATTGGTGTAATCCATTGCCAATTCTTCGAAAACCGTCTTTATAACCTCAGTGGAACTAATAAACCTGACCCTTCTATGAATACCGAATTTCTAAATGTGTTAAGATCAAGCTGCAATGAAACTGATGCATTGTCAATTTCAGCATTAGGATATACATCACATGCCtcatcttcttcctttgttgaagaacaacaaaaaatcactATGGACTCTAAGGAATCTCTATCAGATTTCGGGATGTTATATTACCTCAGCTTATTGCAAGGTAAAGGAATCCTCTATGCTGATCAGCAGCTAATGGAAGGTGAAAAAACAAAGTATTGGGTTCAAGAATATGTATCTAATCCTACTTTGTTCCGTCAAGATTTTGCACAGGCAATGATGAAACTCTCTGATCTTCGGGTTTTGACAATGCCTATGGGACAGATTCGACGCACTTGTTCAAAAGTTGCATGA | 1203 | 0.3483 | MVPPLILPKLTLLILVFCILISFDQHKHNNNITNNNNNNTFNFINTISFPIHSFSSGPVSLSVTNNHYSDSSFSGSNSQSLLEYDFYRNSCPNAERIVRSTVHRLYRTNHTLIPALIRLAFHDCFIQGCDASILLEDDDYIDSEKESPPNGSLKGFDVIEIIKSKLEEACPGVVSCADILVLAARDSVALVGGPFYPLYTGRRDGSNSFADIATDELPSPYADLSQMLLSFKLRGFDEREMVTLLGAHNIGVIHCQFFENRLYNLSGTNKPDPSMNTEFLNVLRSSCNETDALSISALGYTSHASSSSFVEEQQKITMDSKESLSDFGMLYYLSLLQGKGILYADQQLMEGEKTKYWVQEYVSNPTLFRQDFAQAMMKLSDLRVLTMPMGQIRRTCSKVA | 400 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Tsu06g00286 | 400 | PRINTS | Plant peroxidase signature | 374 | 387 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
| Tsu06g00286 | 400 | PRINTS | Plant peroxidase signature | 192 | 207 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
| Tsu06g00286 | 400 | PRINTS | Plant peroxidase signature | 334 | 351 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
| Tsu06g00286 | 400 | PRINTS | Plant peroxidase signature | 154 | 167 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
| Tsu06g00286 | 400 | PRINTS | Plant peroxidase signature | 91 | 110 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
| Tsu06g00286 | 400 | PRINTS | Plant peroxidase signature | 173 | 183 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
| Tsu06g00286 | 400 | PRINTS | Plant peroxidase signature | 239 | 251 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
| Tsu06g00286 | 400 | PRINTS | Plant peroxidase signature | 115 | 135 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
| Tsu06g00286 | 400 | Gene3D | Peroxidase, domain 2 | 223 | 379 | - | - | |
| Tsu06g00286 | 400 | Pfam | Peroxidase | 98 | 363 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
| Tsu06g00286 | 400 | SUPERFAMILY | Heme-dependent peroxidases | 82 | 399 | IPR010255 | GO:0004601|GO:0006979|GO:0020037 | |
| Tsu06g00286 | 400 | PRINTS | Haem peroxidase superfamily signature | 174 | 191 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
| Tsu06g00286 | 400 | PRINTS | Haem peroxidase superfamily signature | 192 | 204 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
| Tsu06g00286 | 400 | PRINTS | Haem peroxidase superfamily signature | 113 | 127 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
| Tsu06g00286 | 400 | PRINTS | Haem peroxidase superfamily signature | 240 | 255 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
| Tsu06g00286 | 400 | PANTHER | PEROXIDASE | 75 | 398 | - | - | |
| Tsu06g00286 | 400 | Gene3D | - | 81 | 222 | - | - | |
| Tsu06g00286 | 400 | PANTHER | PEROXIDASE 25-RELATED | 75 | 398 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
| Tsu06g00286 | 400 | CDD | secretory_peroxidase | 82 | 399 | IPR033905 | GO:0004601|GO:0042744 | |
| Tsu06g00286 | 400 | ProSiteProfiles | Plant heme peroxidase family profile. | 81 | 400 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Tsu06g00286 | Tsu-Chr6 | 2377440 | 2380194 | Dispersed/Wgd |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Tsu06g00286 | 79 | 399 | Peroxidase | AT4G33870 | 48.512 | 1.24e-114 | 338 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Tsu06g00286 | K00430 | - | twl:119991033 | 404.831 |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Tsu06g00286 | 06 | 2377440 | 2380194 | Tsu06g00286 | 06 | 2377440 | 2380194 | ECH |