Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g00271 ATGCCAAAGAACATTCAAAAATCCCTTCAAAATTATTTCTACAAAATCAAAAGTCATCCTAGGTCACAAAAATTTCGTTTATCCTCTAAGAAATGGATTGCTATCAATGGTTGCAAACATCCTAGAACTCCTTCTTTCTCGTTCGacgacaaaaacaacaacaacaagaatgATGATGAAGCTACACTAGCGGACATCGACCGTTTTCTCTTCGAGAATTTCAAGTCTTTATACCTTGAAGATGACGAAAAAACTGATTGTCACCACGACACTAAAAGGGCCGTCTCATcagatgaagaggaagaagatgaagatgaagcggaagaagaaaaaactcgagaagaaaaatatccaaaattagGTCCTATATTTTTCGATCCATCTGAGGAAAGACCATTGGATCTTCGTGGATCTAATAGATTCTTTTTGACACGTGGCTTCTCGGGCTCCATGTCGAACACAACATCAACTACAAACACATTTGAAGAAATGGGATCATGCTCAAACTCATCAACCCCAAAAAACTTCAATAATAGTTCATCTTCAAAAGATGATCAAGTGAATATTCCTCATAATTGTGTTGTTGTGTTGGCTAGTTCGCCAAATCCTTATGACGATTTCCGAAGATCCATGGAAGAAACAGTGGAAGCAAGATTGAGGGACAATCAATGTGTGGATTGGGATTTTATGGAAGagcttttgttttgttatatgAACTTGAATGAAAAGAAATCATATAAGTTTATATTAAGTGCTTTTTGTGACTTGATCAGTCTCATGAGGCAAAGTTCAGAGAGCGAACCGATGAAGCCGCGGAGCGTTCGGACTGTTAGGATTGGGAGGGAGGTAAGGAAGACTAAAGAATTAACATTAAAATTTGCAGGTTCGAGATAA 894 0.3333 MPKNIQKSLQNYFYKIKSHPRSQKFRLSSKKWIAINGCKHPRTPSFSFDDKNNNNKNDDEATLADIDRFLFENFKSLYLEDDEKTDCHHDTKRAVSSDEEEEDEDEAEEEKTREEKYPKLGPIFFDPSEERPLDLRGSNRFFLTRGFSGSMSNTTSTTNTFEEMGSCSNSSTPKNFNNSSSSKDDQVNIPHNCVVVLASSPNPYDDFRRSMEETVEARLRDNQCVDWDFMEELLFCYMNLNEKKSYKFILSAFCDLISLMRQSSESEPMKPRSVRTVRIGREVRKTKELTLKFAGSR 297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g00271 297 ProSiteProfiles OVATE domain profile. 196 259 IPR006458 -
Tsu06g00271 297 TIGRFAM A_thal_3678: uncharacterized plant-specific domain TIGR01568 194 259 IPR006458 -
Tsu06g00271 297 PANTHER OVATE TRANSCRIPTIONAL REPRESSOR 3 280 - -
Tsu06g00271 297 MobiDBLite consensus disorder prediction 87 129 - -
Tsu06g00271 297 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 3 280 IPR038933 GO:0045892
Tsu06g00271 297 Pfam Transcriptional repressor, ovate 200 258 IPR006458 -
Tsu06g00271 297 Coils Coil 97 117 - -
Tsu06g00271 297 MobiDBLite consensus disorder prediction 159 185 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g00271 Tsu-Chr6 2270906 2271799 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Tsu06g00271 Ovate 2.7e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g00271 - - mtr:MTR_4g012060 395.971
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu06g00271 06 2270906 2271799 Tsu06g00271 06 2270906 2271799 ECH
Tsu02g05483 02 63148038 63149177 Tsu06g00271 06 2270906 2271799 PCT