Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g00270 ATGAGCGTGgtaggttttgattttggtaaTGAGAGTTGCATTGTTGCGGTTGCTAGACAGAGAGGTATTGATGTTGTTTTAAACGATGAATCGAAACGCGAAACTCCTGCTATTGTGTGTTTCGGCGAGAAGCAGCGTTTTATTGGTACTGCTGGTGCTGCTTCAACTATGATGAATCCTAAGAATTCAATTTCACAGATTAAGAGACTTATTGGGAAGAAATTTTCTGATCCTGATTTGCAGAGTGATCTTAAGTCTTTACCTTTTAGTGTTAGTGAAGGACCTGATGGGTATCCTTTGATTCATGCTAGGTATTTAGGGGAAGTTAAGACGTTTACTCCTACGCAAGTGTTTGCGATGATGTTATCGAATATGAAAGAGATAGCTACGAAAAATCTTAATGCTGCGGTTCATGATTGTTGTATTGCGATTCCGGTTTATTTTACTGATCTTCAGAGAAGGGCTGTTTTGGATGCTGCTGTTATTGCTGGTTTGCATCCGCTTCGGTTGCTTCATGAAACTACTGCAACTGCATTGGCTTATGGGATTTATAAGACGGATCTGCCTGAAAACGATCCGTTGAATGTGGCCTTTGTTGATATTGGACATGCTAGTATGCAGGTGTGCATTGCTGGATTCAAAAAGGGGCAGCTGAAAGTGTTAGCTCATTCTTTTGATAGGTCTCTTGGTGGTAGGGATTTTGATGAGGTTTTGTTCCATCATTTTGCTGGGAAGTTTAAGGAGGAGTATAAAATCGATGTATTTCAGAATGCTAGGGCATGTTTGAGGCTTAGGGCATCTTgtgagaagatgaagaagatgctTAGTGCAAATCCTGTGGTGCCCATGAACATTGAGTGCTTGATGGATGAGAAGGATGTGAAGGGTATCATGAAGCGGGAGGAGTTTGAGGAACTGAGTCTCCCGATTTTGGAGCGTGTCAAGGGACCTTTGGAGAGGGCACTTGTCGATGCAGGACTCTCAGTTGATGATATTCATATGGTTGAGGTCGTTGGTTCGGGCTCTCGTGTACCGGCTATAAACAGAATATTGACTGATTTTTTCAAGAAGGAGCCTAGGCGGACAATGAACGCTAGTGAATGTGTTGCTAAAGGAGCTGCATTGCAATGTGCTATTCTTAGCCCAACTTTTAAAGTCCGAGAATTTCAGGTCAATGAAAGCTTTCCTTTCTCAATTTCCCTTGCATGGAAAGGTTCTGGTCCAGATGCACAAGATAGTGTACCCGATAATCAGCAGAGTTCCCTTGTTTTTCCGAAGGGTAATCCTATACCAAGTATCAAGGCACTTACATTCTACCGGTCAGGAACATTTGCCATTGATGTACAATATAGTGATGTGAGTGGGCAACAAACACCTGCTAAGATCAGCTCATATACGATTGGTCCTTTCGAAGTTAAGCAAAGCGAAAAAGCAAAAGTTAAAGTGAAAGTTCGTTTGAATGTGCATGGAATTGTTTCTGTTGACATGGCAACTCTCTTGGAAGAGGAAGAAGTTGAGGCTTCAGTTTCCAAAGAATCAGCAAACGAACCTACTAAGATGGATGCTGATGAAGCTCCTGCTGATGCTGCTGCTCCTTCCAATGGCAATGACGCTGATGTTAATATGCAAGATGCAAAGGCTAATGCTGATACCCCTGGGGTTGAAAATGGCGTCCCTGAGACTGGAGATAACCCTGCACAAATGGATGTCGATGATACCAAGATTCCAAAGAAAAAggttaagaaaacaaatgttCCTGTGGCCGAGTTAGTTTATGGAGCAATGGCACCTGCGGATGTCCAGAAAGCTTTAGAGAAGGAGTATGAAATGGCATTGCAAGATCGTATAATGGAAGAAACAAAGGACAAGAAAAATGCAGTAGAGGCCTATGTTTATGACATGAGAAATAAGCTTAATGACAAATACCAAGACTTTGTCATCCCTTCAGAGAGGGAAGGTCTTGCTGCTAAACTTCAGGAGGTGGAAGATTGGTTATACGAGGACGGCGAAGATGAAACTAAAGGTGTATATGTTGCAAAACTTGAAGAGCTCAAAAAGCAAGGTGACCCGATTGAAGAGCGTTACAAAGAATACACGGAGAGGGGTGAAATAATTAATCAGTTGAACTATTGTATAGCTAGTTACAGAGAAGCTGCAATGTCAGCTGATCCCAGATATGATCACATTGACATCAATGAGAAACAGAAGGTCTTAAATGAATGCGTTGAAGCTGAGAACTGGCTTAGGGAGAAGAAGCAGCAGCAGGACACACTTCCAAAACATGCCAACCCTGTACTATTGGTAGCTGAAATAAGAAAGAAAGCTGAGGCCCTTGATAGGTTCTGCAAGCCGATTATGACGAAACCAAAGCCGGCCAAGCCAGCTGCTCCACAAGCACCCCCAAGCCCAGCTTCTTCGGGTTCTGAGCAGCAGCAATCTCACGCAGATGAGAATCCCAGCAGCACCAATGAGAATACTGGGGATGATGGTAATCAGGCTTCATCAGCATCCAGTGAACCAATGGAGACTGATAAGCCAGACAATGCCGGTTCTGCAtaa 2559 0.4228 MSVVGFDFGNESCIVAVARQRGIDVVLNDESKRETPAIVCFGEKQRFIGTAGAASTMMNPKNSISQIKRLIGKKFSDPDLQSDLKSLPFSVSEGPDGYPLIHARYLGEVKTFTPTQVFAMMLSNMKEIATKNLNAAVHDCCIAIPVYFTDLQRRAVLDAAVIAGLHPLRLLHETTATALAYGIYKTDLPENDPLNVAFVDIGHASMQVCIAGFKKGQLKVLAHSFDRSLGGRDFDEVLFHHFAGKFKEEYKIDVFQNARACLRLRASCEKMKKMLSANPVVPMNIECLMDEKDVKGIMKREEFEELSLPILERVKGPLERALVDAGLSVDDIHMVEVVGSGSRVPAINRILTDFFKKEPRRTMNASECVAKGAALQCAILSPTFKVREFQVNESFPFSISLAWKGSGPDAQDSVPDNQQSSLVFPKGNPIPSIKALTFYRSGTFAIDVQYSDVSGQQTPAKISSYTIGPFEVKQSEKAKVKVKVRLNVHGIVSVDMATLLEEEEVEASVSKESANEPTKMDADEAPADAAAPSNGNDADVNMQDAKANADTPGVENGVPETGDNPAQMDVDDTKIPKKKVKKTNVPVAELVYGAMAPADVQKALEKEYEMALQDRIMEETKDKKNAVEAYVYDMRNKLNDKYQDFVIPSEREGLAAKLQEVEDWLYEDGEDETKGVYVAKLEELKKQGDPIEERYKEYTERGEIINQLNYCIASYREAAMSADPRYDHIDINEKQKVLNECVEAENWLREKKQQQDTLPKHANPVLLVAEIRKKAEALDRFCKPIMTKPKPAKPAAPQAPPSPASSGSEQQQSHADENPSSTNENTGDDGNQASSASSEPMETDKPDNAGSA 852
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g00270 852 ProSiteProfiles Ig-like domain profile. 345 463 IPR007110 -
Tsu06g00270 852 PANTHER HEAT SHOCK 70 KDA PROTEIN 14 1 851 - -
Tsu06g00270 852 Gene3D Actin; Chain A, domain 4 230 313 - -
Tsu06g00270 852 SUPERFAMILY Actin-like ATPase domain 1 185 IPR043129 -
Tsu06g00270 852 CDD HSPA4_like_NDB 2 381 - -
Tsu06g00270 852 Gene3D - 703 789 IPR029048 -
Tsu06g00270 852 Coils Coil 681 701 - -
Tsu06g00270 852 MobiDBLite consensus disorder prediction 505 523 - -
Tsu06g00270 852 MobiDBLite consensus disorder prediction 802 852 - -
Tsu06g00270 852 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 703 795 IPR029048 -
Tsu06g00270 852 Gene3D - 5 374 - -
Tsu06g00270 852 Gene3D - 596 702 IPR029048 -
Tsu06g00270 852 PRINTS 70kDa heat shock protein signature 363 383 - -
Tsu06g00270 852 PRINTS 70kDa heat shock protein signature 140 160 - -
Tsu06g00270 852 PRINTS 70kDa heat shock protein signature 477 493 - -
Tsu06g00270 852 PRINTS 70kDa heat shock protein signature 332 348 - -
Tsu06g00270 852 PRINTS 70kDa heat shock protein signature 30 42 - -
Tsu06g00270 852 PRINTS 70kDa heat shock protein signature 2 15 - -
Tsu06g00270 852 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 387 592 IPR029047 -
Tsu06g00270 852 Pfam Hsp70 protein 3 696 IPR013126 GO:0005524|GO:0140662
Tsu06g00270 852 PANTHER HSC70CB, ISOFORM G-RELATED 1 851 - -
Tsu06g00270 852 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 597 695 IPR029048 -
Tsu06g00270 852 Gene3D - 186 360 - -
Tsu06g00270 852 MobiDBLite consensus disorder prediction 505 571 - -
Tsu06g00270 852 SUPERFAMILY Actin-like ATPase domain 195 380 IPR043129 -
Tsu06g00270 852 MobiDBLite consensus disorder prediction 786 852 - -
Tsu06g00270 852 Gene3D - 38 113 - -
Tsu06g00270 852 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 384 628 IPR029047 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g00270 Tsu-Chr6 2264571 2269199 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu06g00270 4 406 Calmodulin-binding Proteins AT1G16030 36.946 2.89e-86 286
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g00270 K09489 - gmx:100778196 1321.99
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu06g00270 06 2264571 2269199 Tsu06g00270 06 2264571 2269199 ECH