Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g00191 ATGAGACGACAACTTCATTATCCTCTTTCAAAGTTGTATAAATGCTTCAAATCGTTAAAGTCTAAAAGAGGAGGGAAAGATAAATTTAGATGGAGGGTGTTTTCTTTGAAGGAATTATACTCTGCTACCAATAATTTCAACTATGACAACATACTTGGAGAAGGAGACTTTGGTAGTGTGTATTGGGGAAAACTTTGGAATGGATCTCAAATTGCAGTGAAAAGATTGAAAGTTTGGAGCAACAAATCAGATAGGGAGTTTGCAGTTGAACTTGAGATATTGGGAAGAGTACAACACAAGAATCTTATTTGTTTACACGGCTATTGTGCCGAAGGACAAGAACGATTAATTGTGTATGATTATATGCCAAATTTCAACTTGTTCTCCCATCTTCATGGATCACAATCAGCAGAATGCCTTCTTGACTGGAATCGGCGGATAAGTATTACCATTGGATGTGCCGAGGGAGTTGCGTGA 477 0.3774 MRRQLHYPLSKLYKCFKSLKSKRGGKDKFRWRVFSLKELYSATNNFNYDNILGEGDFGSVYWGKLWNGSQIAVKRLKVWSNKSDREFAVELEILGRVQHKNLICLHGYCAEGQERLIVYDYMPNFNLFSHLHGSQSAECLLDWNRRISITIGCAEGVA 158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g00191 158 SUPERFAMILY Protein kinase-like (PK-like) 29 158 IPR011009 -
Tsu06g00191 158 ProSitePatterns Protein kinases ATP-binding region signature. 52 74 IPR017441 GO:0005524
Tsu06g00191 158 PANTHER OS01G0750732 PROTEIN 11 158 - -
Tsu06g00191 158 Gene3D Phosphorylase Kinase; domain 1 11 121 - -
Tsu06g00191 158 Pfam Protein tyrosine and serine/threonine kinase 48 157 IPR001245 GO:0004672|GO:0006468
Tsu06g00191 158 PANTHER BNAA05G14800D PROTEIN 11 158 - -
Tsu06g00191 158 ProSiteProfiles Protein kinase domain profile. 46 158 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g00191 Tsu-Chr6 1600166 1605432 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu06g00191 34 158 Trihelix Transcription Factor Family AT1G70460 50.400 2.53e-36 130
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XV Tsu06g00191 PK_Tyr_Ser-Thr 1.7e-15 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g00191 - - csin:114282129 231.491