Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g00167 ATGGAGGAGTCGGGAGAAAATTGGCCTTCTGAGTCTGATTTGGTAATTGGCGGTGATGATGTAATTTTTGAAGATGGAGATCAATCTGAATCTGTGTGTGGTGATAGAGAAATTAAGGAGAAATTGATGGCACTTTCAGCCACCATAGGCTTGAACAAGATGGACGACACTACAATCCTAGACAAAGCTAAAATCTATGTGGAAAACCTTCAAGAACGTGTGAAAGAGCTAGAACAAGAAGATGGATCTAACattaaaaggactaaaattgTGAACTCAAATGAATACAATTGTGGAACAAGTGAAAATCTTCCCGAGGTCCAAGCAAAAGTATTACAAAAGGAAGTTCTTGTCATAATCCATTGTGAGAAACAAAATGGTGTCATACTCAAAATATTGACACACcttcaaaatcttcatcttTCAATAGTTAACAGTAGTGTCTTGCGATTTGGAAAATCCAACCTTGACATCACCATTGTTGCGCAGATGGGTGATGGATACAACATTACAGTGGATGAATTAGTGAAAACCCTGAGATTAGTGATCTTGACACAATAG 561 0.3601 MEESGENWPSESDLVIGGDDVIFEDGDQSESVCGDREIKEKLMALSATIGLNKMDDTTILDKAKIYVENLQERVKELEQEDGSNIKRTKIVNSNEYNCGTSENLPEVQAKVLQKEVLVIIHCEKQNGVILKILTHLQNLHLSIVNSSVLRFGKSNLDITIVAQMGDGYNITVDELVKTLRLVILTQ 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g00167 186 Coils Coil 60 87 - -
Tsu06g00167 186 PANTHER PROTEIN, PUTATIVE-RELATED 36 186 - -
Tsu06g00167 186 PANTHER BHLH TRANSCRIPTION FACTOR 36 186 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g00167 Tsu-Chr6 1334950 1340109 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu06g00167 32 180 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G37850 37.278 3.00e-24 95.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g00167 - - aip:107616596 197.978