Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g00158 ATGGCAACAAATGGGGGTGCTAATAAGAAGGTTTGTGTAACTGGGGCTGGAGGGTTTGTAGCATCATGGCTTGTtaaagcttcttctttccaaaGGTTACTCTGTCCATGGAACTGTCAGACAACCTGTGTATGCATGTATGACTTTGACCACACTGCAGGTAGCAAGAAATATGAACACTTGCTGAAACTCGAGAGAGCTTCTGAGAACATTACACTTTTCGAAGCAGATATCTTAAATTATGAATCTGTTTACAAAGCAATTGTCGGATGCAGTGCCGTTTTCCATGTTGCTAGTCCTGTACCTTCAACAGTTGTACCAAATCCTGAGGTGGAAGTGATTGAGCCTGCGGTGAAGGGAACATCTAATGTACTTGAAGCTTCTCTCAAAGCTAAAGTGGAATGTGTCGTCTTTCTATCATCTGCAGCTGCTGTTGCTATCAATCCTAATTTCCCGGAAGATAAAGTGATTGACGAGTCTTGTTGGTCTGACAAAGACTACTGCAAAAAAACTAAGatcaatatatTGGTGAACGATTTTCCTCAAGATTGTTGGGAATCAGTCTTCAAATTCCTTGAGCAAGGACATGATTTGGAGTCTGTTTCTATGCTCGAGGTCATAGATTTCAGTCACTTCAGTGGTGAACTAAAAGGCTTgcttcatcaaatttcacaatcTGAGTTGGACCTTGATTTGGTTAATCTTTCCAACCAGAGAACACTTCCTGTTGATGGATTGCGAGAACTCGGTTCAAAGATGATAACCTTAAGGGTTTTGATTTGCTCAAACATCGGCTGTCTTCGTGATAGCCACCTCGTTGTGATATCTTATTGTTTTCCATTTCTTGAAGAGCTTGACATTAGCTTTCCTTTAGATTCTCAAGCATCTGATTTCGGATTACTAAAGCTATCTTCAATGCCTGAGAATCTGCGCAAGATTGATTTTTCCGGAAATCACTTGATCACCGATAAATCTCTTTTGTCTCTATGCGAGAACTGCAGTTCATTGGAAGAAATTTCATTCTTCAAATGTTTCAAGATATCGCAAGTTGGAATTGCTTCTGCAATTCGAATGAGACCGAGGTTGGCTTCCATTTCTTTTAACAGCCTCACCTATTAA 1119 0.3896 MATNGGANKKVCVTGAGGFVASWLVKASSFQRLLCPWNCQTTCVCMYDFDHTAGSKKYEHLLKLERASENITLFEADILNYESVYKAIVGCSAVFHVASPVPSTVVPNPEVEVIEPAVKGTSNVLEASLKAKVECVVFLSSAAAVAINPNFPEDKVIDESCWSDKDYCKKTKINILVNDFPQDCWESVFKFLEQGHDLESVSMLEVIDFSHFSGELKGLLHQISQSELDLDLVNLSNQRTLPVDGLRELGSKMITLRVLICSNIGCLRDSHLVVISYCFPFLEELDISFPLDSQASDFGLLKLSSMPENLRKIDFSGNHLITDKSLLSLCENCSSLEEISFFKCFKISQVGIASAIRMRPRLASISFNSLTY 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g00158 372 Gene3D - 2 175 - -
Tsu06g00158 372 PANTHER NAD(P)-BINDING ROSSMANN-FOLD SUPERFAMILY PROTEIN 9 173 - -
Tsu06g00158 372 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 9 173 - -
Tsu06g00158 372 SUPERFAMILY RNI-like 201 364 - -
Tsu06g00158 372 Pfam 3-beta hydroxysteroid dehydrogenase/isomerase family 13 159 IPR002225 GO:0003854|GO:0006694|GO:0016616
Tsu06g00158 372 Gene3D Ribonuclease Inhibitor 176 371 IPR032675 -
Tsu06g00158 372 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 8 176 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g00158 Tsu-Chr6 1238648 1241863 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu06g00158 10 172 Monolignol Biosynthesis Gene Families AT2G33590 50.307 5.54e-46 158
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g00158 - K10268 gmx:100820070 270.011