Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g00152 ATGGCAACAAATGGGGGTGCTAATAAGAAGGTTTGTGTAACTGGGGCTGGAGGGTTTGTAGCATCATGGCTTGTTAAGCTTCTCCTTTCCAAAGGTTACTCTGTCCATGGAACTGTCAGACAGCCTGGTAATACATCTCATCTCATCACCATTGGTAGTAAGAAATATGAACACTTGCTGAAACTTGAGAGAGCTTCTGAGAACCTTACACTTTTCGAAGCAGATATCTTGAATTATGAATCTGTTTACAAAGCAATTGTTGGATGCAGTGCCGTTTTCCATGTTGCTAGTCCTGTACCTTCAACAGTTGTACCAAATCCTGAGGTGGAAGTGATTGAGCCTGCAGTGAAGGGAACATCTAATGTACTTGAAGCTTCTCTCAAAGCTAAAGTGGAACGCATCGTCTTTCTATCATCTGCAGCTGCTGTTGCTATCAATCCTAATTTCCCGGAAGATAAAGTGATTGACGAGTCTTGTTGGTCTGACAAGGACTACTGCAAAAAAACTAAGAACTGGTATTATTATTCGAAGACAGAAGCAGAAGAGCAGGCACTGAATTTCGCGAAAAGAATTGGACTTGATTTTGTAAGCATTTGCCCTCCCCTTGTTTTGGGGCCAATTTTACACTCAACCACTAATTCAAGTAGCTTAGTTCTCATCAAACTTTTAAAAGGCTGTGATTCATTGAAGAATGAACATCGTTGGATAGTTGACGTACGAGACGTAGTTGATGCAATACTTTTGGCATATGAGAATCACAAGGCAGAAGGGAGATACATATGTTTTTCACACACTGTCGCGAAACGAGATTTGGTGGAGAAATTGAAGAGTCTATTTCCAAACTACAAGTACCCTACAAACTATACTGAGGTGGATGATAACAGAATGCTGAGCTCAAAGAAACTGCAAAGTTTAGGTTGGAAATTCAGGACATTGGTGGAAACACTCATTGATTCTGTTAAAAGCTATAAGGAAGCTGGACTACtctaa 990 0.404 MATNGGANKKVCVTGAGGFVASWLVKLLLSKGYSVHGTVRQPGNTSHLITIGSKKYEHLLKLERASENLTLFEADILNYESVYKAIVGCSAVFHVASPVPSTVVPNPEVEVIEPAVKGTSNVLEASLKAKVERIVFLSSAAAVAINPNFPEDKVIDESCWSDKDYCKKTKNWYYYSKTEAEEQALNFAKRIGLDFVSICPPLVLGPILHSTTNSSSLVLIKLLKGCDSLKNEHRWIVDVRDVVDAILLAYENHKAEGRYICFSHTVAKRDLVEKLKSLFPNYKYPTNYTEVDDNRMLSSKKLQSLGWKFRTLVETLIDSVKSYKEAGLL 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g00152 329 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 9 328 - -
Tsu06g00152 329 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 8 324 IPR036291 -
Tsu06g00152 329 Gene3D - 2 329 - -
Tsu06g00152 329 PANTHER NAD(P)-BINDING ROSSMANN-FOLD SUPERFAMILY PROTEIN 9 328 - -
Tsu06g00152 329 CDD FR_SDR_e 11 307 - -
Tsu06g00152 329 Pfam NAD dependent epimerase/dehydratase family 11 255 IPR001509 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g00152 Tsu-Chr6 1194569 1196981 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu06g00152 10 329 Monolignol Biosynthesis Gene Families AT2G33590 55.901 3.04e-126 362
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g00152 - - mtr:MTR_4g009040 512.686