Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g00151 ATGGCAACAAATGGGGGTGCTAATAAGAAGGTTTGTGTAACTGGGGCTGGAGGGTTTGTAGCATCATGGCTTgttaagcttcttctttccaaaGGTTACATTGTCCATGGAGCTGTTAGACAGCTTGGTACAGGTAGTCGGAAATATGAACACTTGCTGAAACTTGAGAGAGCTTCGGAGAACCTTAAACTTTTCGAAGCAGATATCTTGAATTATGAATCTGTTTACAAAGCAATTGTCGGATGCAGTTCCGTTTTCCATGTTGCTACCGCTGTACCTTCAACAGTTGTATCAAATCCTGAGGTGGAAGTGATTGAGCCTGCAGTGAAGGGAACTGCTAATGTACTTGAAGCTTCTCTCAAAGCTAAAGTGGAACGTGTCGTCTTTGTATCATCTGCATCTTCTGTTGCCATCAATCCTAATTTTCCGAAAGATAAAGTGCTTGATGAGTCTTGTTGGTCTGACAAAGAatactacaaaaaaattaagAGCTGGTATTGTTATGCCAAGACAGAAGCAGAAGAGCAGGCCCTGAATTTCGCGAAAAGAACTGGGCTTGATGTTGTAAGCATTTGTCCTACCCTTGTTTTGGGGCCAGTTTTACAGTCAACCACTAATGCAAGCAGCTTGTTTCTCATCGATCTTTTAAAAGGCTGTGATACATTGGAGAATGAGCACCGTCGGATTAATCGGATAGTTGACGTACGAGACGTAGCTGATGCGATCCTGTTGGCTTATGAGAATCATGAAGCAGAAGGGAGATACATATGCACTTCACACGCTATCACGGACCGAGATTTGGTGGAGAAATTGAAGAGTATATTTCCAAACTACAAGTACCCTACAAACTATATTGAGCTGGATGATTACAGAATGATGAGCTCAGAGAAACTGCAAAGTTTAGGTTGGAAATTCAGGCAACTGGAGGAAACACTCATTGATTCTGTTGAGAGCTATAAGGAGGCTGGACTACTCTAA 978 0.41 MATNGGANKKVCVTGAGGFVASWLVKLLLSKGYIVHGAVRQLGTGSRKYEHLLKLERASENLKLFEADILNYESVYKAIVGCSSVFHVATAVPSTVVSNPEVEVIEPAVKGTANVLEASLKAKVERVVFVSSASSVAINPNFPKDKVLDESCWSDKEYYKKIKSWYCYAKTEAEEQALNFAKRTGLDVVSICPTLVLGPVLQSTTNASSLFLIDLLKGCDTLENEHRRINRIVDVRDVADAILLAYENHEAEGRYICTSHAITDRDLVEKLKSIFPNYKYPTNYIELDDYRMMSSEKLQSLGWKFRQLEETLIDSVESYKEAGLL 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g00151 325 Coils Coil 55 75 - -
Tsu06g00151 325 PANTHER NAD(P)-BINDING ROSSMANN-FOLD SUPERFAMILY PROTEIN 9 324 - -
Tsu06g00151 325 Gene3D - 2 325 - -
Tsu06g00151 325 Pfam NAD dependent epimerase/dehydratase family 11 251 IPR001509 -
Tsu06g00151 325 CDD FR_SDR_e 11 303 - -
Tsu06g00151 325 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 9 324 - -
Tsu06g00151 325 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 8 320 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g00151 Tsu-Chr6 1187886 1194086 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu06g00151 10 325 Monolignol Biosynthesis Gene Families AT2G33590 59.434 2.52e-129 370
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g00151 - - mtr:MTR_4g009040 490.73