Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g00150 ATGGCAACAAATGGGGGTGCTAATAAGAAGGTTTGTGTAACTGGGGCTGGAGGATTTGTAGCATCATGGCTTGTTAAGCTTCTCCTTTCCAAAGGTTACTCTGTCCATGGAACTGTCAGACAACCTGGTAGTAAGAAATATGAACACTTGCTGAAACTTGAGAGAGCTTCTGAGAACCTTACACTTTTCGAAGCAGATATCTTGAATTATGAATCTGTTTACAATGCAATTGTCGGATGCAGTGCCGTTTTCCATGTTGCTAGCCCTGTACCTTCGACAGTTGTACCGAATCCTGAGGTGGAAGTGATTGAGCCTGCAGTGAAGGGAACATCTAATGTACTTGAAGCTTCTCTCAAAGCTAAAGTGGAACGTGTCGTCTTTGTATCATCTGGAGCTGCTGTTGCTTTCAATCCTAATTTCCCTAAAGATAAAGTGCTTGACGAGTCTTGTTGGTCTGACAAAGACTACTGCAAAAAAACTAAGAACTGGTATTGTTATGCCAAGACAGAAGCAGAAGAGCAGGCACTGAATTTCTCAGAAAGAACTGGGCTTGATGTTGTAAGCATTTGTCCTACCCTTGTTTTGGGGCCAATTTTACAGTCATCCACTAATGCAAGCAGCTTGGTTCTCATCAAACTTTTAAAAGGCTGTGATACATTGGAGAATAAGCACCGTTGGATAGTTGACGTACGAGACTTGGTCGATGCAATACTGTTGGCTTATGAGAATCATGAGGCAGAAGGGAGATACATATGCACTTCACACGCTGTCACGGAACGAGATATGGTGGAGAAATTGAAGAGTATATTTCCAAATTACAAGTACCCTACAAACTATACTGAGCTGGATGATAACAGAATGATGAGATCAGAGAAAATACAAAGTTTAGGATGGAAATTCAGGCCATTGGAGGAAACACTCATTGATTCTGTTAAAAGCTATGAAGAAGCTGGACTACTTCAATCACAATGA 972 0.4136 MATNGGANKKVCVTGAGGFVASWLVKLLLSKGYSVHGTVRQPGSKKYEHLLKLERASENLTLFEADILNYESVYNAIVGCSAVFHVASPVPSTVVPNPEVEVIEPAVKGTSNVLEASLKAKVERVVFVSSGAAVAFNPNFPKDKVLDESCWSDKDYCKKTKNWYCYAKTEAEEQALNFSERTGLDVVSICPTLVLGPILQSSTNASSLVLIKLLKGCDTLENKHRWIVDVRDLVDAILLAYENHEAEGRYICTSHAVTERDMVEKLKSIFPNYKYPTNYTELDDNRMMRSEKIQSLGWKFRPLEETLIDSVKSYEEAGLLQSQ 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g00150 323 CDD FR_SDR_e 11 298 - -
Tsu06g00150 323 Gene3D - 2 323 - -
Tsu06g00150 323 PANTHER NAD(P)-BINDING ROSSMANN-FOLD SUPERFAMILY PROTEIN 9 320 - -
Tsu06g00150 323 Pfam NAD dependent epimerase/dehydratase family 11 246 IPR001509 -
Tsu06g00150 323 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 9 320 - -
Tsu06g00150 323 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 8 315 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g00150 Tsu-Chr6 1173847 1190860 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu06g00150 10 320 Monolignol Biosynthesis Gene Families AT2G33590 61.342 9.26e-137 389
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g00150 - - mtr:MTR_4g009040 531.561