Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g00131 ATGGAAAGCAAAGACAACATTGAAGCTGTCAGAATGTTCTTAAATTCTAGCTTAGAAACATCAGAAGCTATTTCTTCTGCATTAAATGAATCTGGTTCAAGATTGAAGCTACTTAACCAAAAATTTCTATCCATGCAAGCTTCTCTTAGGCCAATCTCAATACAAAACTTTCCTTTTTCTGATGTTGAACATGGTTTAGACAGTGTTCTATGTTCTGTTTCAGCAGTCCACAAGGTTTTTCAATGTGTTAACCACTTGGAACATTCTCTTTCGGAAGATGCGAGTTCCGATTTATTCACATATGTCTCAAACACAAAGAAGCTTGAAGAAGCATTGAAGCTTCTCACTGATAATTGTAAGTTAGCAACTAGTTGGTTGAAGAGTGTTTTTGAGTtcttacaaaacaaaacaacaattagTACTAATGAGGTTTACCTATTGAATATAAAGAAATCCTTTAGAATATTGCAAGAATTGCAGGCCATAGAGGACGATGCACGCCTAGATGGAGGAATTCTCAGTATTGCCCTCGACAAACTAGAGATTGCTTTTCACAAACTTCTAATAGAAAATTCTATGCCTCTTCCTTTGGTTTCATTGACATCACAGATTGATCAGCAAAACAATGCCACGGGCGTGGAACAAGGTTTGAAATTTCCAAGTTCTTTGACAGGGAAACTTCAGGTCATTGCCGAAAGATTAAATGCTAATAACAGGCTAGACAAGTGTCAAACTATGTATGTTGAAGTTCGAGGTACGAATGCTCGCCGAAGTTTGAAGACTTTGGATTTGAGCTACCTTGAGACTTCAACATCTGAGTTTGAGGCACATGGAACGGAAAATTGCATAGACCAATGGGGAAAGCATTTGGAGTTGGTTGTTAAGAAACTTCTTGAGGTTGAATACAAGCTATGTACTATTGTATTTGAGAAAATTGGTTCAAAAGCATGGATAAGTTGTTTTGGAAAGATTGCTTATGAATCAAGAATATTTTCATTTATCAAATTTGGAAAGGTTGTTACTGAGAGAAAAAATGATCCTTTCAAGCTATTGAATTTGTTGTCAATGTTTAGAGTCTTGAATGGTCTAAGACTAAAATTTAATCAACTCTTTAGAGGTGAAGCTTGTGAAGAAATTAGAATTGTTACAAAGGATCTTATCACAAGAGTTGTTAATGGTGCTAGTGAGATATTCTTGCAACTTTCAGAACAAGTGAAGTTGCAAAGACCAACTTGTCCTCCCTCAGATGGTACTGTTCCTAAGCTGGTAAGTTTTGTTACTGATTATTGCAATAAGCTTCTTAGTGATGAGTATAAGCCACATTTGAATAAGGGTTCTTTAATTGGGAATATGATGGGAGATTCTTGGTTAAAAGCACATGAACAATATAAAGAATATTATGCAACACTTTATTTAAGGAATACTTGGGGAAATCTTAAAAATATTCTTGTAGTTTCATCTTCTATGACTTGTCAAGATTTAGCTAAAAGAATAAATGCTTTTATTCTAGCTTTTGATGAAAGGTACAAGAAACAATGTAATTTGATAATCTATGATGAGATATTGAGGGGAAGTGTATGTAAACATTTGGTGGAATGTATTATACCAATCTATAAGGTTTACTTGAAGAATTATATTTTGGCACTTGAAAGTGATGATGCTATGGTTGACAATAAGAGTATTAAATATACACCACAAAGTTTGGAAAATAGGATTAGGTCATTGTTTCAACCAAAGTTGAGAAAGCATGGTGATAGCATTAAACACAAAGATTTGattagtaaaataaaagaaGTGAGTCAACAATTTCGTTTGACTTTAGTTGGTTTATAG 1833 0.3361 MESKDNIEAVRMFLNSSLETSEAISSALNESGSRLKLLNQKFLSMQASLRPISIQNFPFSDVEHGLDSVLCSVSAVHKVFQCVNHLEHSLSEDASSDLFTYVSNTKKLEEALKLLTDNCKLATSWLKSVFEFLQNKTTISTNEVYLLNIKKSFRILQELQAIEDDARLDGGILSIALDKLEIAFHKLLIENSMPLPLVSLTSQIDQQNNATGVEQGLKFPSSLTGKLQVIAERLNANNRLDKCQTMYVEVRGTNARRSLKTLDLSYLETSTSEFEAHGTENCIDQWGKHLELVVKKLLEVEYKLCTIVFEKIGSKAWISCFGKIAYESRIFSFIKFGKVVTERKNDPFKLLNLLSMFRVLNGLRLKFNQLFRGEACEEIRIVTKDLITRVVNGASEIFLQLSEQVKLQRPTCPPSDGTVPKLVSFVTDYCNKLLSDEYKPHLNKGSLIGNMMGDSWLKAHEQYKEYYATLYLRNTWGNLKNILVVSSSMTCQDLAKRINAFILAFDERYKKQCNLIIYDEILRGSVCKHLVECIIPIYKVYLKNYILALESDDAMVDNKSIKYTPQSLENRIRSLFQPKLRKHGDSIKHKDLISKIKEVSQQFRLTLVGL 610
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g00131 610 Pfam Exo70 exocyst complex subunit 444 573 IPR046364 GO:0000145|GO:0005546|GO:0006887
Tsu06g00131 610 Pfam Exo70 exocyst complex subunit 285 443 IPR046364 GO:0000145|GO:0005546|GO:0006887
Tsu06g00131 610 PANTHER EXOCYST COMPLEX PROTEIN EXO70 444 599 IPR004140 GO:0000145|GO:0006887
Tsu06g00131 610 PANTHER EXOCYST SUBUNIT EXO70 FAMILY PROTEIN 444 599 - -
Tsu06g00131 610 PANTHER EXOCYST COMPLEX PROTEIN EXO70 3 444 IPR004140 GO:0000145|GO:0006887
Tsu06g00131 610 PANTHER EXOCYST SUBUNIT EXO70 FAMILY PROTEIN 3 444 - -
Tsu06g00131 610 SUPERFAMILY Cullin repeat-like 76 576 IPR016159 -
Tsu06g00131 610 Gene3D Exocyst complex component Exo70 131 444 - -
Tsu06g00131 610 Gene3D Exocyst complex component Exo70 445 583 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g00131 Tsu-Chr6 1030500 1032515 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu06g00131 9 584 EXO70 exocyst subunit family AT4G31540 41.221 1.56e-158 469
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g00131 K07195 - mtr:MTR_2g041650 917.916
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu06g00131 06 1030500 1032515 Tsu06g00131 06 1030500 1032515 ECH