Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g00085 ATGGCAACTTCTCCTTCATTTTTGCTActaagtttcttcttcttcttcttcttcttcactacTCTTCCTGTCTCTGCTACTGACCATATTGTAGGTGCTAACCGTGGCTGGAACCCTGGGATTAACTACACTCTTTGGGCTAATAACCACACTTTCTATGTCGGTGATTATATTTCATTTAGGTACCAGAAGAATCAGTACAATGTGTTTATGGTAAACCAAACAGGTTATGACAACTGCACAACAGAAGGTGCTATTGGGAATTGGACTAGTGGCAAAGATTTCATACTATTCAACAAAACTATGAGATATTACTTCATTTGTGGTAATGGCCAATGCATGAATGGAATGAAAGTCTCAGTTTTTGTTCATCCACTTCCTTCTCCTCCTCCTTCCTCATCTGATCAACTTCATTCAACACCAAAATCTGCTGCTCCTATGATCTTGGAACATTTAGGACTTAAGTCTCTAATGttgtcttttgtttttgttttgtttggatttgttttgGTATAA 516 0.3353 MATSPSFLLLSFFFFFFFFTTLPVSATDHIVGANRGWNPGINYTLWANNHTFYVGDYISFRYQKNQYNVFMVNQTGYDNCTTEGAIGNWTSGKDFILFNKTMRYYFICGNGQCMNGMKVSVFVHPLPSPPPSSSDQLHSTPKSAAPMILEHLGLKSLMLSFVFVLFGFVLV 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g00085 171 ProSiteProfiles Phytocyanin domain profile. 27 125 IPR003245 GO:0009055
Tsu06g00085 171 PANTHER BLUE COPPER PROTEIN 10 162 IPR039391 GO:0009055
Tsu06g00085 171 Gene3D - 25 126 IPR008972 -
Tsu06g00085 171 Pfam Plastocyanin-like domain 37 117 IPR003245 GO:0009055
Tsu06g00085 171 PANTHER OS09G0557900 PROTEIN 10 162 - -
Tsu06g00085 171 SUPERFAMILY Cupredoxins 26 124 IPR008972 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g00085 Tsu-Chr6 672120 673805 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu06g00085 6 133 Phytocyanin Superfamily AT5G15350 41.221 9.76e-35 118
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g00085 - - gmx:100305555 212.616
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu06g00085 06 672120 673805 Tsu06g00085 06 672120 673805 ECH