Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g00067 ATGTCTTTGAAGATAGGAGCTGAAAATTGgccaaaatcatcaccaaaaGAGGTTGAAGAACCATTGATAGTTATAAGAAAGTATGATGAAGAGAAACACAAAGTTGAAGTAGAGAAATTGGAGAGACTTTGTGAAGTTGGACAAAGAGGAAAACCTTCTCTTGTTACTGACTTATTGGGTGATCCTATTTGCAGAATTCGTCACTTTCAATTACATGTCATGCTGGTTGCAGAATATGGAGAAGAAGGAGAAATTGTTGGAGTGATAAGGGGTTGTGTGAAAACAGTTGGAAGAGGAAATTCAGCTTATGTAAAACTTGCTTATGTTTTAGGACTTAGAGTCTCTCCCAAACACAGGAGATTTGGCATTGGCACAAAATTAGTTGAACATTTAGAAGAGTGGTGCAAGCAAAAAGGAGCTAAGTATGCATATATGGCAACTGATTGTACAAATGAGCCATCCATCAATTTGTTCACAAAAAAATGTGGTTACTCAAAATTCAGGACACTAACAATGCTAGTGCAACCTGTTCATGCTCACTACAAGCCAATCAGCACAAATATTGCCATTCTTCGCCTACCACCGCGTCTAGCCGAGCTCACATACAACCATATGTTAGCCAATTCAGAATTTTTCCCAAAAGACATGGACttgattttgtcaaataaaCTTAATTTGGGCACATTCATGGCCATCCCAAAAAAATACCTAACAAAATGTGATCCAAAAAATGGTATTTTCCCTCCAAGCTATGCAATATTAAGTGTGTGGAACACAAAAGAAGTGTTCAAATTACAAGTTAAAGGAGTGTCACCATTTGTACATGCATGTTGTGTAGGTACAAGATTATTAGATGGATGTATGCCATGGCTAAGGTTACCTTCATTTCCTAATGTTTTTAAGCCATTTGGAATTTATCTAATGTATGGATTACATATGGAGGGTAAATTtggaaaacaacttatgaagtCATTATGTGGATTTGTCCATAATATGGCTAGAAATGATGGTGGCTGTGGGGCTATTGTGGCTGAAGTTAGTCAAAGGGACCCAGTTAGAGAAGCAATTCCACATTGGACCAAATTATCTTGGGCTGAGGACATGTGGTGCATTAAGAATCTTGAAGGTATGAAGAAGGAAATTTTCCATGAAAAATGTGGACTCTCTAATGGTTTAGATTATAGACCCTCTTCATCAATAATTTTTGTTGATCCTCGTGATTTTTGA 1227 0.357 MSLKIGAENWPKSSPKEVEEPLIVIRKYDEEKHKVEVEKLERLCEVGQRGKPSLVTDLLGDPICRIRHFQLHVMLVAEYGEEGEIVGVIRGCVKTVGRGNSAYVKLAYVLGLRVSPKHRRFGIGTKLVEHLEEWCKQKGAKYAYMATDCTNEPSINLFTKKCGYSKFRTLTMLVQPVHAHYKPISTNIAILRLPPRLAELTYNHMLANSEFFPKDMDLILSNKLNLGTFMAIPKKYLTKCDPKNGIFPPSYAILSVWNTKEVFKLQVKGVSPFVHACCVGTRLLDGCMPWLRLPSFPNVFKPFGIYLMYGLHMEGKFGKQLMKSLCGFVHNMARNDGGCGAIVAEVSQRDPVREAIPHWTKLSWAEDMWCIKNLEGMKKEIFHEKCGLSNGLDYRPSSSIIFVDPRDF 408
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g00067 408 Gene3D - 20 169 - -
Tsu06g00067 408 PANTHER OS12G0561600 PROTEIN 1 408 - -
Tsu06g00067 408 Pfam Acetyltransferase (GNAT) family 74 164 IPR000182 GO:0016407
Tsu06g00067 408 CDD NAT_SF 74 144 - -
Tsu06g00067 408 PANTHER N-ACETYLTRANSFERASE 1 408 - -
Tsu06g00067 408 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 23 170 IPR016181 -
Tsu06g00067 408 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 23 194 IPR000182 GO:0016407
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g00067 Tsu-Chr6 526113 528777 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Tsu06g00067 Acetyltransf_1 2.8e-19 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g00067 - - mtr:MTR_4g007130 738.413
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu06g00067 06 526113 528777 Tsu06g00067 06 526113 528777 ECH