Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g00063 ATGATTCTAACATATGATATTGATTCCAAATTTCAGTCCATGGATGAATTGGAGGAAGAACTGAGAAGGGTGACTGCAGAAAACAAGAAATTGGTGGAAATGCTTTCAGTGGTTTGCGAAAATTACAACACTTTGAGAAGTCATTTGGTGGAATATATGAGGAGAAATCCTGAGAAGGAACTTAGTACAtcatcaaagaaaagaaaatctgAAAGCAgcaacaataataatagtaatttgaTTGGAATTAACAATGGAAACTCCGAGAGTAGCTCTACCGATGAAGAATCATGTAAGAAACCGAGGGAGGAAGAAAACCTTAAAGCCAAAATTTCGAGAGCTTATGTTAGGACCGAAGCATCCGATACAGGCCTTATTGTGAAGGATGGATACCATTGGAGAAAATATGGACAAAAAGTGACAAGAGATAACCCTTGTCCAAGAGCTTATTTCAAATGCTCTTTTGCTCCAAGTTGTCCAGTCAAAAAGAAGGTTCAAAGAAGTGTGGATGATCAATCGATGCTTGTAGCTACTTATGAAGGAGAGCACAATCATCCTCAACCTCCTCAAATGGAGTCAACATCTGGCTCTGGCCGTAGCGTGAGCCTCAATTCAGTACCAACTTCAGCGTCACTCACCTCATCAGCGCCAAAAGTTGTTACACTTGACTTAACAAATTCTAAGAGTAGTAATAAAGATTCCAAGAATATTGAACCAAAAAAAGATTCACTTAAGGTACCAAAGAATTTGGTGGATCAAATGGCTACTTCTTTGACAACTGATCCTAATTTTAGAGCAGCACTTGTTGCAGCCATATCAGGAAAATTGGTGCATAATAATTAA 843 0.3677 MILTYDIDSKFQSMDELEEELRRVTAENKKLVEMLSVVCENYNTLRSHLVEYMRRNPEKELSTSSKKRKSESSNNNNSNLIGINNGNSESSSTDEESCKKPREEENLKAKISRAYVRTEASDTGLIVKDGYHWRKYGQKVTRDNPCPRAYFKCSFAPSCPVKKKVQRSVDDQSMLVATYEGEHNHPQPPQMESTSGSGRSVSLNSVPTSASLTSSAPKVVTLDLTNSKSSNKDSKNIEPKKDSLKVPKNLVDQMATSLTTDPNFRAALVAAISGKLVHNN 280
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g00063 280 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 7 280 IPR044810 GO:0003700
Tsu06g00063 280 MobiDBLite consensus disorder prediction 68 92 - -
Tsu06g00063 280 SMART WRKY_cls 127 187 IPR003657 GO:0003700|GO:0006355|GO:0043565
Tsu06g00063 280 SUPERFAMILY WRKY DNA-binding domain 125 188 IPR036576 GO:0003700|GO:0006355|GO:0043565
Tsu06g00063 280 Pfam WRKY DNA -binding domain 128 186 IPR003657 GO:0003700|GO:0006355|GO:0043565
Tsu06g00063 280 PANTHER TRANSCRIPTION FACTOR 7 280 - -
Tsu06g00063 280 Coils Coil 7 34 - -
Tsu06g00063 280 ProSiteProfiles WRKY domain profile. 126 188 IPR003657 GO:0003700|GO:0006355|GO:0043565
Tsu06g00063 280 MobiDBLite consensus disorder prediction 187 232 - -
Tsu06g00063 280 MobiDBLite consensus disorder prediction 56 106 - -
Tsu06g00063 280 Gene3D WRKY domain 111 189 IPR036576 GO:0003700|GO:0006355|GO:0043565
Tsu06g00063 280 MobiDBLite consensus disorder prediction 180 245 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g00063 Tsu-Chr6 496625 499545 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu06g00063 17 280 WRKY Transcription Factor Family AT1G80840 55.515 2.54e-92 273
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Tsu06g00063 WRKY 2.2e-23 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g00063 - - gmx:100170678 371.703
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu06g00063 06 496625 499545 Tsu06g00063 06 496625 499545 ECH