Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g00062 atGTCGGGGCAATCACAGCGTTTGAATGTGGTCCCCACAGTGACAATGCTTGGTGTTGTGAAAGCACGTTTGGTTGGTGCAACAAGAGGTCATGCACTTCTCAAGAAGAAAAGTGATGCTTTAACTGTTCAGTTTCGTCAGATCCTGAAAAAGATTGTTTCGACAAAGGAATCAATGGGTGATATCATGAAAACATCTTCATTTGCGTTAACTGAGGCTAAGTATGTAGCTGGTGATAACATCAAGCATGTTGTGCTTGAGAATGTTAAGGAAGCTTCACTCAGGGTGCGATCCCGTACTGAGAACGTTGCTGGAGTGAAGCTTCCGAAATTTGAGTACTCTGCTGATGGTGAGGCTTCGAAGAATGACCTTACCGGGTTGGCTAGAGGTGGTCAGCAGGTGCAGCAGTGTCGTGTTGCTTATATTAAGGCAATTGAGGTTCTTGTTGAGCTTGCTTCGTTGCAGACCTCTTTCCTTACCCTTGATGATGCTATTAAGACTACTAACCGTAGGGTTAATGCTCTTGAGAATGTTGTTAAGCCACGGTTGGAGAATACTATTAGTTACATTAAGGGTGAGTTGGATGAGCTCGAGAGAGAGGATTTCTTTAGGTTGAAGAAGATTCAGGGTTATAAGAGGAGGGAAATTGAAAGGAAGATGGTGCTTGCTAGGGAACAACAGGCTGTTGAAAAGTTGCAATTGCTGAAAGGGGTTTCGTATGAGTCCTCAAACTTGTTGGCTGGTACAACTGGTAAAGATGAGGATATCCTtttctaa 777 0.4337 MSGQSQRLNVVPTVTMLGVVKARLVGATRGHALLKKKSDALTVQFRQILKKIVSTKESMGDIMKTSSFALTEAKYVAGDNIKHVVLENVKEASLRVRSRTENVAGVKLPKFEYSADGEASKNDLTGLARGGQQVQQCRVAYIKAIEVLVELASLQTSFLTLDDAIKTTNRRVNALENVVKPRLENTISYIKGELDELEREDFFRLKKIQGYKRREIERKMVLAREQQAVEKLQLLKGVSYESSNLLAGTTGKDEDILF 258
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g00062 258 Pfam ATP synthase subunit D 18 209 IPR002699 GO:0046961
Tsu06g00062 258 TIGRFAM V_ATPase_subD: V-type ATPase, D subunit 9 212 IPR002699 GO:0046961
Tsu06g00062 258 PANTHER V-TYPE PROTON ATPASE SUBUNIT D-RELATED 1 258 - -
Tsu06g00062 258 Gene3D - 1 199 - -
Tsu06g00062 258 PANTHER V-TYPE ATP SYNTHASE SUBUNIT D 1 258 IPR002699 GO:0046961
Tsu06g00062 258 Coils Coil 180 200 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g00062 Tsu-Chr6 486608 488250 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu06g00062 1 258 Primary Pumps ATPases(2) AT3G58730 77.863 1.02e-148 414
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g00062 K02149 - gmx:100801612 429.483