Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g00059 ATGCCTGTCTATGATAATACTTCACTAGTCTCGGGTGCCGGCCAAACCGTGTGTGTCACTGGTGCTGGTGGGTTCATAGCTTCTTGGCTTGTTAAACTTCTCTTGGAGAAAGGTTACACTGTTAGAGGAACCCTCCGAAACCCAGAGGATCCAAAGAATGGTCACTTGAAAGAATTGGAAGGAGCAAAAGAGAGATTAACTTTGCATAAGGTTGATCTTCTTGATCTTAATTCAATTCAATCTGTTATTCATGGTTGCCATGGTGTATTCCACACAGCCTCCCCTGTTACTGACAACCCTGAAGAGATGTTGGAGCCAGCAATAAATGGAACTAAGAATGTGATTATAGCGTCCGCAGAGGCAAAAGTGAGACGAGTTGTGTTCACTTCATCGATTGGAACCGTCTATATGAACCCAAATACGAGTAGAGATGTTGTGGTTGATGATACATATTGGAGTGATTTAGAATATTGCAAGGACACAAAGaattGGTATTGTTATGGGAAGACAGTGGCTGAACAATCAGCATGGGATATAGCAAAAGAAAACCAAGTGGATTTGGTTGTAGTGAATCCAGTTTTGGTTCTTGGGCCATTACTACAATCCACAGTTAATGCAAGTACAATTCACATCCTCAAATACCTTAATGGTTCAGCCAAGACTTATGTGAATGCAACTCAGTCTTATGTTAGTGTTAAGGATGTTGCATTAGCACATGTTCTTGTTTATGAGACAAACTCTGCTTCTGGTAGATACATATGTTCTGATGCTTCCTTACATCGTGGTGAAGTTGTTGAAATTTTGGCCAAGTATTTTCCTGAGTACCCACTTCCTACCAAGTGTTCAGATGAAAAGAATCCAAGAGTGAAACCATTCATATTCTCAAATCAAAAGCTGAAAGATTTAGGATTGGAATTCACCCCTGTGAGGCAATGTCTATATGAGACAGTTAGAAGTCTACAAGAGAAAGGACACCTTCCTATTCCCCAAATGGAAGAAGACTCTGTTTAA 1011 0.4036 MPVYDNTSLVSGAGQTVCVTGAGGFIASWLVKLLLEKGYTVRGTLRNPEDPKNGHLKELEGAKERLTLHKVDLLDLNSIQSVIHGCHGVFHTASPVTDNPEEMLEPAINGTKNVIIASAEAKVRRVVFTSSIGTVYMNPNTSRDVVVDDTYWSDLEYCKDTKNWYCYGKTVAEQSAWDIAKENQVDLVVVNPVLVLGPLLQSTVNASTIHILKYLNGSAKTYVNATQSYVSVKDVALAHVLVYETNSASGRYICSDASLHRGEVVEILAKYFPEYPLPTKCSDEKNPRVKPFIFSNQKLKDLGLEFTPVRQCLYETVRSLQEKGHLPIPQMEEDSV 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g00059 336 PANTHER CINNAMOYL-COA REDUCTASE-LIKE PROTEIN 10 329 - -
Tsu06g00059 336 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 10 329 - -
Tsu06g00059 336 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 13 321 IPR036291 -
Tsu06g00059 336 CDD FR_SDR_e 17 304 - -
Tsu06g00059 336 Pfam NAD dependent epimerase/dehydratase family 17 247 IPR001509 -
Tsu06g00059 336 Gene3D - 14 336 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g00059 Tsu-Chr6 466440 469485 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu06g00059 14 280 Monolignol Biosynthesis Gene Families AT1G80820 73.034 6.28e-139 393
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g00059 K09753 - gmx:100799994 565.844