Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g00058 ATGTCAGCCCATGATAACATTTCATTAGTCTCCAGTGTCGACCAAACCGTGTGTGTCACTGGTGCCGGCGGGTTCATAGCTTCCTGGCTTGTTAAACTTCTCTTGGAGAAAGGCTACACCGTTAGAGGAACCGTCCGAAACCCGGAGGATCCAAAGAATAGTCACTTGAAAGAGTTAGAAGGAGCAAGAGAGAGGCTAAGTTTGCATAAGGTTGATCTTCTTGATCTTAATTCAATCCAATCTGTTATTCATGGCTGCCATGGTGTGTTCCACACAGCTTCCCCTGTCACTGACAATCCGGAGGAGGTGTTGGAGCCAGCAGTGAATGGAACCAAGAACGTGATTATTGCGGCCGCAGAAGCGAAAGTGAGACGTGTTGTGTTCACTTCATCGATTGGAACAGTTTATATGGACTCAAATACGAGTAGAGATGTTGTGGTTGATGAGTCCTATTGGAGTGATTTAGAATACTGCAAGAACACTAAGAATTGGTATTGCTATGGGAAGACAATGGCAGAAAAATCAGCATGGGATATAGCAAAAGAAAACCAAGTGGATTTGGTTGTAGTAAACCCAGTTGTGGTAATTGGACCATTGCTACAATCAACAGTTAATGCTAGTACAATGCACATTCTAAAGTATCTTAATGGTTCAGCCAAGACTTATGTGAATGCAACACAATCTTATGTTAGTGTTAAGGATGTTGCATTAGCACATGTTCTTGTTTATGAGACAAACTCTGCTTCTGGTAGATACATATGTTCTGATGCTTCCTTACATCGTGGTGAAGTTGTTGAAATTTTGGCTAAGTATTTTCCTGAGTATCCACTTCCTACCAAATGTTCAGATGAAAAGAATCCAAGAGTAAAAccatataatttttcaaatcaaaagcTGAAAGAATTGGGATTGAAATTCACCTCTGTGAAGCAATGTCTGTATGACACAGTTAGGAGTCTACAAGAGAAAGGACATCTTCCTATTCCTCCAATGCAAGAAGACtatgtttaa 1011 0.3996 MSAHDNISLVSSVDQTVCVTGAGGFIASWLVKLLLEKGYTVRGTVRNPEDPKNSHLKELEGARERLSLHKVDLLDLNSIQSVIHGCHGVFHTASPVTDNPEEVLEPAVNGTKNVIIAAAEAKVRRVVFTSSIGTVYMDSNTSRDVVVDESYWSDLEYCKNTKNWYCYGKTMAEKSAWDIAKENQVDLVVVNPVVVIGPLLQSTVNASTMHILKYLNGSAKTYVNATQSYVSVKDVALAHVLVYETNSASGRYICSDASLHRGEVVEILAKYFPEYPLPTKCSDEKNPRVKPYNFSNQKLKELGLKFTSVKQCLYDTVRSLQEKGHLPIPPMQEDYV 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g00058 336 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 11 329 - -
Tsu06g00058 336 Pfam NAD dependent epimerase/dehydratase family 17 247 IPR001509 -
Tsu06g00058 336 Gene3D - 14 336 - -
Tsu06g00058 336 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 15 321 IPR036291 -
Tsu06g00058 336 CDD FR_SDR_e 17 304 - -
Tsu06g00058 336 PANTHER CINNAMOYL-COA REDUCTASE-LIKE PROTEIN 11 329 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g00058 Tsu-Chr6 452855 457262 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu06g00058 15 280 Monolignol Biosynthesis Gene Families AT1G80820 71.805 8.17e-137 387
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g00058 K09753 - gmx:100811528 556.214