Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g00037 ATGGACAATGAGGAAATCCCATCAGTACCTTCTACCCCTGCAACACCAGGTACTCCTGGTGCTCCTCTTTTTGGTGGTTTCAAATCTGAGAGAACCGGAGGAAATGCTTCTGTTGTTAGTAGAAGTAAGTCACTCCTCAAGAATTTGAAATGTTTTAGTGTTCAAGAATGGACTTTGGAAGATGGTGCCTTACCTAATGTCTCTTGCTCTTTGCCTCCTCCTCCTGTCCCTCTTGCTAAAAAGGTTGGAGCAGAGTTTATAGGCACATTCATTCTAATGTTTGCTGGAATAGCCACTGCAATTGTGAACCAAAAGATACATAATTCAGAGACACTAATTGGATGTGCTGGAGCTACTGGACTTGCTGTTATGATCATAATTTTATCAACTGGTCACATCTCTGGTGCTCATCTCAATCCTGCCGTCACCATTTCCTTTGCCGCATTAAAGCACTTCCCTtggaaaaatGTGCCTTTGTATATTGGTGCACAAGTTCTGGCATCAATATGTGCATCATATACGTTGAAAGGGGTTTTTCATCCATTCATGAATGGTGGAGTCACAGTTCCTTCAGTAGAATATGGCCAAGCTTTTGCTTTAGAGTTTATTATCAGCTTTAATCTCATGTTTGTTGTCACTGCTGTGGCTACCGACACAAGAGCTGTGGGTGAGCTTGCGGGAATCGCGGTGGGAGCCACAGTCATGCTCAACATACTCATAGCTGGGCCTGCAACTGGAGGTTCAATGAATCCAGTAAGAACATTGGGCCCAGCAATTGCTACAAACAACTACAAAGGTTTATGGATATATCTCATAGCCCCTATTATTGGTGCTCTAGCTGGGGCAGGTGCCTACACTGCCGTCAAACTCCATGATGAAGAATTTAACTCTGAGGTAAAAGTCTCTTCTGCTCCTGGAAGCTTCAGAAGATGA 933 0.4341 MDNEEIPSVPSTPATPGTPGAPLFGGFKSERTGGNASVVSRSKSLLKNLKCFSVQEWTLEDGALPNVSCSLPPPPVPLAKKVGAEFIGTFILMFAGIATAIVNQKIHNSETLIGCAGATGLAVMIIILSTGHISGAHLNPAVTISFAALKHFPWKNVPLYIGAQVLASICASYTLKGVFHPFMNGGVTVPSVEYGQAFALEFIISFNLMFVVTAVATDTRAVGELAGIAVGATVMLNILIAGPATGGSMNPVRTLGPAIATNNYKGLWIYLIAPIIGALAGAGAYTAVKLHDEEFNSEVKVSSAPGSFRR 310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g00037 310 MobiDBLite consensus disorder prediction 1 35 - -
Tsu06g00037 310 CDD MIP 80 285 IPR000425 GO:0015267|GO:0016020|GO:0055085
Tsu06g00037 310 PANTHER AQUAPORIN NIP2-1 3 295 IPR034294 -
Tsu06g00037 310 ProSitePatterns MIP family signature. 137 145 IPR022357 -
Tsu06g00037 310 Pfam Major intrinsic protein 78 285 IPR000425 GO:0015267|GO:0016020|GO:0055085
Tsu06g00037 310 PRINTS Major intrinsic protein family signature 231 253 IPR000425 GO:0015267|GO:0016020|GO:0055085
Tsu06g00037 310 PRINTS Major intrinsic protein family signature 200 218 IPR000425 GO:0015267|GO:0016020|GO:0055085
Tsu06g00037 310 PRINTS Major intrinsic protein family signature 156 175 IPR000425 GO:0015267|GO:0016020|GO:0055085
Tsu06g00037 310 PRINTS Major intrinsic protein family signature 119 143 IPR000425 GO:0015267|GO:0016020|GO:0055085
Tsu06g00037 310 PRINTS Major intrinsic protein family signature 268 288 IPR000425 GO:0015267|GO:0016020|GO:0055085
Tsu06g00037 310 PRINTS Major intrinsic protein family signature 80 99 IPR000425 GO:0015267|GO:0016020|GO:0055085
Tsu06g00037 310 PANTHER BNAA02G36290D PROTEIN 3 295 - -
Tsu06g00037 310 Gene3D Glycerol uptake facilitator protein. 75 301 IPR023271 -
Tsu06g00037 310 SUPERFAMILY Aquaporin-like 77 297 IPR023271 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g00037 Tsu-Chr6 334436 338396 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu06g00037 1 310 Major Intrinsic Protein MIP AT1G80760 73.077 1.30e-158 443
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g00037 K09874 - gmx:100798410 421.394
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu06g00037 06 334436 338396 Tsu06g00037 06 334436 338396 ECH