Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g00017 ATGGTGATAGTTTCTGTCATAGGAATTCTCATAGTTTTGGCTATTTTTGGTCTTATAACTGGATTTTGGTGCTACTACAAGACGAAGAACAAAAACTTTGATAAGTATCCTCAAGATACTTTAGAGGAAGATGATTTCTTTGATGGTCTATCTAGTATGCCGGCGCGATTTACTTATAGTGCTCTAGCTAGAGCTACTAAGGACTTCTCCACGAAAATCAGGGAAGGAGGATTTGGCTCGGTGTATCTAGGATTACTTGAAGATGACACACAATTGGCAGTGAAAAAATTGGAAGGAGTTGGACAAGGAGCAAAAGAGTTCAAAGCAGAAGTATCGATAATTGGAAGTATTCACCATGATCATCTTGTGAAGCTTAAAGGGTTCTGCGCTGAAGGTCCTCATCGCCTTCTTGTGTATGAATATATGGCAAGAGGTTCATTGGATAAATGGATCTTCAAAAACAGTGAAAACACTTTGTTGTTAACTTGGGAAACAAGGTACAACATTGCAATAGGAACTGCAAAAGGATTAGCCTATCTTCATGAGGAATGTGAAGTTAGGATCATTCATTGTGATATCAAACCACAAAATGTTCTTCTTGATGATAATTTCATGGCTAAGGTTTCGGATTACGGACTGGCGAAGCTAATGAGCAGAGAACAAAGTCATGTTTTCACAACTCTTAGAGGAACAAGAGGTTATTTAGCACCAGAATGGATAACTAATTACGCGATTTCAGAGAAGAGTGATGTGTTTAGCTATGGAATGCTTTTGCTTGAGATTATTGGTGGAAGAAAAAACTATAATCAATGGGAAGGACTGGAGAAAGCGCATTTTCCTTCTTATGTATAA 852 0.3791 MVIVSVIGILIVLAIFGLITGFWCYYKTKNKNFDKYPQDTLEEDDFFDGLSSMPARFTYSALARATKDFSTKIREGGFGSVYLGLLEDDTQLAVKKLEGVGQGAKEFKAEVSIIGSIHHDHLVKLKGFCAEGPHRLLVYEYMARGSLDKWIFKNSENTLLLTWETRYNIAIGTAKGLAYLHEECEVRIIHCDIKPQNVLLDDNFMAKVSDYGLAKLMSREQSHVFTTLRGTRGYLAPEWITNYAISEKSDVFSYGMLLLEIIGGRKNYNQWEGLEKAHFPSYV 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g00017 283 Gene3D Phosphorylase Kinase; domain 1 32 141 - -
Tsu06g00017 283 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 1 283 - -
Tsu06g00017 283 ProSiteProfiles Protein kinase domain profile. 67 283 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu06g00017 283 ProSitePatterns Serine/Threonine protein kinases active-site signature. 188 200 IPR008271 GO:0004672|GO:0006468
Tsu06g00017 283 Gene3D Transferase(Phosphotransferase) domain 1 142 282 - -
Tsu06g00017 283 SUPERFAMILY Protein kinase-like (PK-like) 51 275 IPR011009 -
Tsu06g00017 283 SMART serkin_6 67 281 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu06g00017 283 Pfam Protein kinase domain 71 272 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu06g00017 283 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-KINASE SD2-5 1 283 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g00017 Tsu-Chr6 223939 224790 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu06g00017 3 270 Receptor kinase-like Gene Family AT5G20050 42.857 1.44e-76 238
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Tsu06g00017 Pkinase 3.1e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g00017 - - gmx:100786024 491.886