Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g00014 atgATGAGACTGTgccttctcttcttcttgcaTTTGTATTCTGTTTCTGCAGTACTCAACTCAGATGGGTTGGCACTCTTATCATTCATGTCTCACTGGACATCTATTCCTCCTCCCATAAACTCCACATGGATTCCATCTCATTCCACACCATGTTCATGGGAGGGTGTCCAATGCCACCCTAATACCCACCGTGTTATCTCTCTCAATCTTTCCTATTATAACATTACTGGTCAACTAGGACCTGAGATTGCTAATTGCACACAACTCAAACACTTAGACCTTACTTATAACTACTTTACCGCCCAAATACCTCACTCCTTCAGTAACCTTCATAAACTTACCTATCTCAGTCTTTCTACTAATCTTCTCACAGGTCCATTTCCCCATCTTTTAACTCAGATCCCTCACCTACTCCTTCTTGATCTCTCTTATAACCAGTTCACCGGTTCCATTCCAACTAGTATTGCCAACATGACTCAACTTCGCAACTTGTATCTCCAAGAAAACAACTTATCCGGTACAATTCCTTCAACCATTGGGAACTGCACTCAACTGCAAGACTTGTATTTGAACTCTAATCAGTTCCAGGGTGTCATTCCACACActctcaataataataatcttgtTCGTTTTGATGTTGCCTACAATAAACTAACAGGTACCATTCCATTTGGTGCCTCTTCTGCTTGTCAAAATTTACTGTTTTTGGATATCTCATTCAATTTCTTTAGTGGAGGTATTCCCTCAGCCATTGGGAATTGTACTTCTTTATCACAATTTGCTGCTGTCAGATGTAACTTGGATGGAACTATTCCATCCTCTATCGGTCTTCTCACCAAGCTTTCCCTTTTAGACCTTCCTGAGAACCATTTGTCCGGAAAAATACCTCCCGAAATAGGTAACTGCAAGTCTTTGAATAACTTACATTTGTATTCCAATCAACTTGATGGAAACATTCCAACTGAATTGGGGAAGCTGAGTGAACTGCAGGACCTTGAACTGTTTTCCAATCAATTGAGTGGTGAAATACCACTTGGCATATGGAAGATTCGACGTCTTGAGCATCTACTTGTGTATAATAATAGCCTTTCTGGGGAACTTCCTGTGGAAATGACAGAGCTCAAGAACCTCAAAAACATCTCCTTGTTTAACAACATGTTCTCTGGAGTCATACCTCAAAGCTTGGGAATTAATAGCACTTTGTTGCAGTTGGACTTTATAAATAACAGGTTCACCGGCAACCTCCCACCAAATCTTTGTTTTGGCAGAAAGTTAAGGGTTTTGAATATGGGCATCAATCAACTTCAAGGTACCATACCTCGTGATGTCGGAAGATGCACAACTCTAACAAGGGTCATTCTTAAACAAAACAACTTTACCGGGCCTCTTCCTGATTTTGAATCCAATACAAATCTCTTATACATGGATATcaccaacaacaaaatcaacggGTCAATTCCATCTAGTTTAGGAAACTGCAAAAATCTCACAGATCTAATTTTGCCTCTGAACAAATTTAGCGGCCCGATACCATCAGAGATAGGAAACCTTGTGAACCTTAGGACTTTGGTTCTTGCTCACAACAACTTAGAAGGTCCTTTGCCATTTCAGCTGTCAAACTGTACCAAAATGGACAAGTTTGACGTGGGATTTAATTTCCTAAATGGTTCTTTGCCATCAAGTTTGCAGAGATGGACGAGGCTAAACACACTAATTTTGAGTGAGAATCGTTTTAGTGGCGGCATTCCAGCTTTCTTGTCGGCATTTAACGATCTTTCTGAACTACAGCTTGGCGGCAATATGTTTGGAGGGAGGATTCCTAGATCAGTTGGGGCACTGCAGAATTTGATTTATGGGTTAAATCTAAGTTCTAATGGGCTGATAGGAGTCATACCGGTGGAAATTGGAAAACTGAAAACTTTGCAAATACTGGATCTGTCTCAGAACAATTTGACAGGAAGCATGCAAGTTCTTGATGAACTCCCTTCATTGGTGcaaatcaatatttcatacaatTATTTTCAGGGTCCCATACCAAAGAGTCTAATGAAGTTGCTTAATTCTCCCTTCTCATCATTTTCGGGGAATCCTGGACTATGTATCAGTTGTTCACCATCCGATGGTTTGGTTTGCACCAAAAGCAGCGATCTAAAACCATGTGATAACAAAACAGTGAAGCACAAAGGCCTCGGCAAAATTGCAATTGTGATGATAGCTTTAGGATCCTCtatatttgttgtttttctgTTGATGGGATTAGTATATATCTTTGTTTATGGCAGAAAATCTAAGCAGCAAGTTCATATTACTGATAATGGTGGTCCTTCGTCCCTTTTTAACAAAGTCTTGAAGGCTACATCGAACCTCAGTGATCAGTATATTATTGGCAGGGGAGCCCACGGAGTTGTTTATAAAGCCCTTATAAGTCAAGACAAAGCTTTTGCTGTAAAGAAGCTAGCATTTGCTGCCAGCAAAGGTAGGAACATGAGCATGATCAGAGAAATTCAAACCCTTGGACAAGTTAGGCATCGAAATCTTGTCAAATTGGAAGAGTTTTGGTTCGGACAAGATTATGGTCTAATTATGTACAGATACATGCCAAATGGAAGCCTTTATGATGTATTGCATGAAAAGAAACCAGCACCATCCTTAGAGTGGAATGTCCGGTATAAGATAGCTGTTGGAATTGCTCATGGACTGTCTTATCTCCATTATGACTGTGATCCTCCCATAGTGCACAGAGATATCAAACCAAACAACATACTTTTAGACTCTGATATGGAGCCTCACATTGCTGACTTTGGTATTGCCAAACTTTTGGACCAGTCTTCTACATCAAATCCTTCCTTATCTGTGCCGGGCACAATTGGTTATATTGCACCagAGAATGCTTATACAACAAGAAGTAGTAGGGAGTGTGACGTGTACAGTTATGGGGTAGTTTTGCTTGAGCTAATAACCAGAAAGAAGGTAGCAGATCCATTATTTATGGAGGGTACTGATATAGTGGGTTGGGTTAGATTGTTGTGGAGTGAAACAGGAGAAATTAACCAAATTGTTGATTCAAGTCTTGTAAATGAATGTCTAGATACCAATATCATGGAAAATGTTACCAAAGTGCTTATGCTGGCTTTGAGATGTACTGAGAAAGATCCACACAAGAGGCCCACAATGACAGATGTTACAAAGCAATTATCAGATTCTAATCCACATAAAATAAGTATGAAGGGCTAG 3237 0.3886 MMRLCLLFFLHLYSVSAVLNSDGLALLSFMSHWTSIPPPINSTWIPSHSTPCSWEGVQCHPNTHRVISLNLSYYNITGQLGPEIANCTQLKHLDLTYNYFTAQIPHSFSNLHKLTYLSLSTNLLTGPFPHLLTQIPHLLLLDLSYNQFTGSIPTSIANMTQLRNLYLQENNLSGTIPSTIGNCTQLQDLYLNSNQFQGVIPHTLNNNNLVRFDVAYNKLTGTIPFGASSACQNLLFLDISFNFFSGGIPSAIGNCTSLSQFAAVRCNLDGTIPSSIGLLTKLSLLDLPENHLSGKIPPEIGNCKSLNNLHLYSNQLDGNIPTELGKLSELQDLELFSNQLSGEIPLGIWKIRRLEHLLVYNNSLSGELPVEMTELKNLKNISLFNNMFSGVIPQSLGINSTLLQLDFINNRFTGNLPPNLCFGRKLRVLNMGINQLQGTIPRDVGRCTTLTRVILKQNNFTGPLPDFESNTNLLYMDITNNKINGSIPSSLGNCKNLTDLILPLNKFSGPIPSEIGNLVNLRTLVLAHNNLEGPLPFQLSNCTKMDKFDVGFNFLNGSLPSSLQRWTRLNTLILSENRFSGGIPAFLSAFNDLSELQLGGNMFGGRIPRSVGALQNLIYGLNLSSNGLIGVIPVEIGKLKTLQILDLSQNNLTGSMQVLDELPSLVQINISYNYFQGPIPKSLMKLLNSPFSSFSGNPGLCISCSPSDGLVCTKSSDLKPCDNKTVKHKGLGKIAIVMIALGSSIFVVFLLMGLVYIFVYGRKSKQQVHITDNGGPSSLFNKVLKATSNLSDQYIIGRGAHGVVYKALISQDKAFAVKKLAFAASKGRNMSMIREIQTLGQVRHRNLVKLEEFWFGQDYGLIMYRYMPNGSLYDVLHEKKPAPSLEWNVRYKIAVGIAHGLSYLHYDCDPPIVHRDIKPNNILLDSDMEPHIADFGIAKLLDQSSTSNPSLSVPGTIGYIAPENAYTTRSSRECDVYSYGVVLLELITRKKVADPLFMEGTDIVGWVRLLWSETGEINQIVDSSLVNECLDTNIMENVTKVLMLALRCTEKDPHKRPTMTDVTKQLSDSNPHKISMKG 1078
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g00014 1078 ProSiteProfiles Protein kinase domain profile. 790 1075 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu06g00014 1078 ProSitePatterns Serine/Threonine protein kinases active-site signature. 912 924 IPR008271 GO:0004672|GO:0006468
Tsu06g00014 1078 MobiDBLite consensus disorder prediction 1055 1078 - -
Tsu06g00014 1078 Gene3D Ribonuclease Inhibitor 264 373 IPR032675 -
Tsu06g00014 1078 PANTHER RECEPTOR KINASE-LIKE PROTEIN XA21 82 1064 - -
Tsu06g00014 1078 Gene3D Ribonuclease Inhibitor 19 179 IPR032675 -
Tsu06g00014 1078 Gene3D Ribonuclease Inhibitor 375 708 IPR032675 -
Tsu06g00014 1078 SUPERFAMILY L domain-like 399 706 - -
Tsu06g00014 1078 SMART LRR_typ_2 184 206 IPR003591 -
Tsu06g00014 1078 SMART LRR_typ_2 327 351 IPR003591 -
Tsu06g00014 1078 SMART LRR_typ_2 518 542 IPR003591 -
Tsu06g00014 1078 SMART LRR_typ_2 159 183 IPR003591 -
Tsu06g00014 1078 SMART LRR_typ_2 639 662 IPR003591 -
Tsu06g00014 1078 SMART LRR_typ_2 279 303 IPR003591 -
Tsu06g00014 1078 SMART serkin_6 790 1073 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu06g00014 1078 ProSiteProfiles Leucine-rich repeat profile. 641 663 IPR001611 GO:0005515
Tsu06g00014 1078 Gene3D Transferase(Phosphotransferase) domain 1 867 1076 - -
Tsu06g00014 1078 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 6 85 - -
Tsu06g00014 1078 SUPERFAMILY RNI-like 62 388 - -
Tsu06g00014 1078 Pfam Leucine rich repeat N-terminal domain 20 59 IPR013210 -
Tsu06g00014 1078 PANTHER RECEPTOR KINASE-LIKE PROTEIN XA21 6 85 - -
Tsu06g00014 1078 Gene3D Phosphorylase Kinase; domain 1 762 866 - -
Tsu06g00014 1078 Pfam Protein kinase domain 794 1064 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu06g00014 1078 Gene3D Ribonuclease Inhibitor 181 263 IPR032675 -
Tsu06g00014 1078 Pfam Leucine rich repeat 621 674 IPR001611 GO:0005515
Tsu06g00014 1078 Pfam Leucine rich repeat 68 124 IPR001611 GO:0005515
Tsu06g00014 1078 MobiDBLite consensus disorder prediction 1062 1078 - -
Tsu06g00014 1078 SUPERFAMILY Protein kinase-like (PK-like) 773 1066 IPR011009 -
Tsu06g00014 1078 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 82 1064 - -
Tsu06g00014 1078 ProSitePatterns Protein kinases ATP-binding region signature. 796 819 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g00014 Tsu-Chr6 163811 167378 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu06g00014 11 1068 Receptor kinase-like Gene Family AT1G73080 51.507 0.0 1027
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Tsu06g00014 Pkinase 8.7e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g00014 - - gmx:100778035 1555.42