Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g00009 atgtgGAAGGGGGGTAAAAAGGGAGGAATAGGAGGAGGAGCAGGAAATGGATTGGTGGCAGTGGCTATTGACAAAGATAAAGGAAGCCAATATGCTCTTAAATGGGCCGCTGATAATCTTCTCACCAGAGGCCAAACCGTTATTCTAATCCATGTTTCTCAGGTCGCCCCCGGCACCACCTTCTCTTCTTCGAGAGGTAGCGAAGCCGCCATTATATGTAACGTCAGCAGTACTTCAGCTGCATCATCTCCACAGAGAAATCAACTTGATAACGCTACCAAGGATCTCTTTCTTACCTTCCATTGCTATTGCACACGCAAAGATatACAATGTCTCGATGTCCTACTTGAAGACACTGATGTTGTCAAAGCAATAACCGAATATGTTTCTCATGCTGCAATTGAGAACTTGGTCATTGGTTCATCATCAAGGCATGGATTTATTAGGTTTAAGTCATCAACTACGCCAAGCAGCATATCAAAGGGGGCGCCAGATTTCTGTAACGTTTATGTCATATCTAAGGGGAAAATCTCATCAGTTCGGAATTCTTCTCGTCCAGCCCCACATTCCTCCCCACTTCTGAGCCATATACATAACAATCTAAATAATCAGGATTTAAATCAATCTGCAGATCAGATATGCTCTAGACGTATGAATTTGagagACAGGACGTCGATGAAACCTCACGGTTGGCAGGATGAATCGATGAAATCTCCATTTAGAAGAGGAGGAAGAGGCACAAGTGGAACGTTATGCGTAGACTTCACAGAATCAGACACAGACATATCATTTGTAAGCTCCGGGAGGCCAAGCAGTGCTTGTTCATCCTCTTTTTACGACTACATTGACTCCGGTCGAACTTCACGAGTTTCTACCAGTTCAGATCGTAGCTTTGGATCCAACCGATTGGGAATCAAGTTCACTGACCCCGGTTCACCAGATACCTCTTTTTCACAAGATACCAGTAGAACATCATTTTCATATTCATCTCAGAACATGGACGAAACAGAAGCTGATATGAGGAGGCTGAAGCTTGAGTTAAAACAAACGATGGAAATGTACAATACAGCATGCAGAGAAGCGCTTACGGCACAACACAAGttaatgGAGATGAGCCACttgaaaattgaagaagaaaagaaattagAAGAGGCACGACTGTCCCAAGAAGCTGCACTGGCAATAGCAGAGAAAGAGAAAGCAAGAAGTAAGGCAGCCCTGGAAACAGCTGAAGCAGCTAGAAAAATTGCAAACGTGGAATTACATAGAAAATCAAGGGTTCCAGTTAAATCTCTTAAAGAAGCAGAGGACATGAGGAAGCTATTGGATAATTTAGCCCAAACTGATGCAAGATATAGGAGATACAGTATTGAGGAGATTGAAGCAGCCACAAACATGTTTTCTGAAAAACTAAAAATTGGGGAAGGTGGTTATGGACCTGTTTATAAATGTTACCTTGATCACACTCCAGTGGCCGTGAAGGTTTTAAGTCCTGATGCGGCTCAAGGGAAATCACAGTTTCAGCAAGAGGTTGACATACTGAGCTGTATGCGCCACCCAAACTTGGTGCTTCTTTTAGGAGCGTGTCCAGAGTATGGTATATTGGTTTATGAATATATGGCGAATGGAAGCTTAGAAGATTGTCTGAATCGAAATAAGAAGGGTGGTAGGGTTCTGTGTTGGCAGCTGAGGTTCCGGATTGCTGCAGAGATAGCCACGGGCTTGCTATTCCTACATCAGACGAAGCCTGAACCTTTGGTGCACCGTGATTTGAAACCTGGAAACATTTTGCTGGACCAGAATTATGTATGTAAGATTAGTGATGTTGGATTGGCAAGGCTGGTCCCTGTGATGGCTGAAAATGTAACACAGTATTGCATGACATCAGCAGCGGGAACATTCTGTTATATTGATCCCGAGTATCAGCAAACAGGAATGCTTGGTGTGAAGTCGGACGTATATTCTCTGGGGATCATATTTCTACAGTTATTGACTGGAAGACATCCAATGGGTTTGGCTCACCATGCAGAGCAGTCTATTGAGAATGGCACATTTGAGGAAATGCTTGACCAATCTCTATCTCACTGGCCCATTCAAGAAGTCCTCACCCTTGCAAATATAGCTGTAAATTGTGCACAACTCAGACGAAAAGATCGCCCAGACCTTGCCAAAGTAGTGTTGCCTGAGCTTATTAAACTCAGAGAGTTTGCTGAAGAAAATATGGGTCCCATCTTTTTAGGAGGAGGCATTACTTTTAGTAGTAGTGGTAGTGCTGAACCTTCCCCCAACAACAGTGAAGTTTCTGTGCAGCAGGATGTGATGAGCGACCCACAGCTTGTACATTCAGGAAGCTCAATAAGTCCACCAACTTCATCAACTCCAACAGAAGAAAATCCTTAA 2400 0.4296 MWKGGKKGGIGGGAGNGLVAVAIDKDKGSQYALKWAADNLLTRGQTVILIHVSQVAPGTTFSSSRGSEAAIICNVSSTSAASSPQRNQLDNATKDLFLTFHCYCTRKDIQCLDVLLEDTDVVKAITEYVSHAAIENLVIGSSSRHGFIRFKSSTTPSSISKGAPDFCNVYVISKGKISSVRNSSRPAPHSSPLLSHIHNNLNNQDLNQSADQICSRRMNLRDRTSMKPHGWQDESMKSPFRRGGRGTSGTLCVDFTESDTDISFVSSGRPSSACSSSFYDYIDSGRTSRVSTSSDRSFGSNRLGIKFTDPGSPDTSFSQDTSRTSFSYSSQNMDETEADMRRLKLELKQTMEMYNTACREALTAQHKLMEMSHLKIEEEKKLEEARLSQEAALAIAEKEKARSKAALETAEAARKIANVELHRKSRVPVKSLKEAEDMRKLLDNLAQTDARYRRYSIEEIEAATNMFSEKLKIGEGGYGPVYKCYLDHTPVAVKVLSPDAAQGKSQFQQEVDILSCMRHPNLVLLLGACPEYGILVYEYMANGSLEDCLNRNKKGGRVLCWQLRFRIAAEIATGLLFLHQTKPEPLVHRDLKPGNILLDQNYVCKISDVGLARLVPVMAENVTQYCMTSAAGTFCYIDPEYQQTGMLGVKSDVYSLGIIFLQLLTGRHPMGLAHHAEQSIENGTFEEMLDQSLSHWPIQEVLTLANIAVNCAQLRRKDRPDLAKVVLPELIKLREFAEENMGPIFLGGGITFSSSGSAEPSPNNSEVSVQQDVMSDPQLVHSGSSISPPTSSTPTEENP 799
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g00009 799 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 19 172 - -
Tsu06g00009 799 SUPERFAMILY Protein kinase-like (PK-like) 451 726 IPR011009 -
Tsu06g00009 799 ProSitePatterns Serine/Threonine protein kinases active-site signature. 586 598 IPR008271 GO:0004672|GO:0006468
Tsu06g00009 799 Pfam Protein kinase domain 468 723 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu06g00009 799 Gene3D HUPs 18 172 IPR014729 -
Tsu06g00009 799 Gene3D Transferase(Phosphotransferase) domain 1 540 741 - -
Tsu06g00009 799 Coils Coil 333 360 - -
Tsu06g00009 799 ProSiteProfiles Protein kinase domain profile. 467 731 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu06g00009 799 PANTHER OS02G0152300 PROTEIN 14 778 - -
Tsu06g00009 799 Coils Coil 379 413 - -
Tsu06g00009 799 MobiDBLite consensus disorder prediction 286 335 - -
Tsu06g00009 799 SMART serkin_6 467 731 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu06g00009 799 CDD STK_N 18 175 - -
Tsu06g00009 799 MobiDBLite consensus disorder prediction 755 799 - -
Tsu06g00009 799 PANTHER BNAA05G18880D PROTEIN 14 778 - -
Tsu06g00009 799 Pfam Universal stress protein family 19 160 IPR006016 -
Tsu06g00009 799 Gene3D Phosphorylase Kinase; domain 1 438 539 - -
Tsu06g00009 799 MobiDBLite consensus disorder prediction 224 240 - -
Tsu06g00009 799 MobiDBLite consensus disorder prediction 224 245 - -
Tsu06g00009 799 MobiDBLite consensus disorder prediction 286 301 - -
Tsu06g00009 799 MobiDBLite consensus disorder prediction 311 334 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g00009 Tsu-Chr6 128498 132305 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu06g00009 1 778 Receptor kinase-like Gene Family AT1G78940 54.988 0.0 810
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Tsu06g00009 Pkinase 8.4e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g00009 - - gmx:100801601 1077.39