Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g04240 ATGGACAACGAAGCGGTAGAATTTGATATTGGGTTGGGAGGAGAATACGAGGAAGAGCCTATTGAGATGGAAGAGGAGGATGATGacgatgaagaagaagaagaggaagatgaTGAATTGGATTTGGGAGAAAGCAGCGGTGCAGTCTATTTTCCAGAGGCGGGAGATCTGGAACCTACGGAGGGAATGGAATTCGAGTCTGAAGAGGCTGCAAAGGCTTTCTATAATTCGTATGCTCGTCGTGTTGGGTTTAGTACTCGTGTCAGCTCATCTCGTCGTTCACGTCGCGACGGAGCCATCATTCAGAGACAATTCGTCTGTGCAAAGGAAGGATTTCGCAATTTGAACGAGAAAAGGACGAAAGATAGAGAGATCAAAAGGCCAAGAACAGTTACTCGAGTAGGATGCAAGGCATCTTTATCTGTTAAAATGCACGATTCTTCTGGGAAATGGATCGTATCTGGTTTCGTTAGAGAGCACAATCACGAACTTGTTCCACCTGATCAGGTTCACTGCCTTCGTTCACACAGGCAAATATCTGGATCTGCAAAGACACTCATAGACACTCTACAGGCTGCTGGTATGGGTCCTCGTAGAATTATGTCTGCACTTATCAAAGAGTATGGCGGTATTAGCAAAGTCGGCTTTACCGAGGTTGACTGTAGGAATTACATGAGGAATAATCGCCACAGAAGTTTACAGGGTGACATTCAACTTGTTCTTGATTATTTGAGACAAATGCATgctcaaaaccctaattttttctttgCTGTTCAAGGTGATCTTGATGATGAGGAGCATTCCATCACCAATGTTTTCTGGGCTGACCCCAAGGCAAGGTTGAATTATACTTATTTCGGTGATACTGTCACTTTTGACACTACTTACCGCTCTAATAGGTATCGTTTACCCTTTGCTCCCTTTACTGGTGTTAATCATCATGGTCAGCCTGTTCTCTTTGGCTGTGCTTTTCTAATTAATGAATCCGAAGCTTCGTTTGTCTGGCTTTTCAAGACATGGCTTACGGCCATGTCTGGACGCCCCCCACTATCAATAACTACCGACCATGATTCTGTTATTCAGTCTGCCATAATGCAAGTGTTCCCTAACACTCGCCACCGTTTCTGCAAGTGGCACATCTTTAAGCAATGCCAGGAGAAGTTGTCTCACATTTTCCTCCAGTTTCCAAATTTTGAAGCCGAGTTTCACAAATGTGTTAACTTGACAGACTCAATTGACGAATTCGAGTCTTGCTGGTCCAAACTTTTAGATAGATATGCTCTCAGGGAGAATGAATGGCTTCAAGCAATACATTCTGCTTGCAGGCAGTGGGTACCTGTATATTTGCGAGACACATTCTTTGCTGAAATGTCCATCACTCAACGAAGTGATAGCATGAACTCTTACTTTGATGGCTATGTGAATGCTTCAACCAGTTTAAATCAGTTCTTTAAGCTTTATGAGAAAGCACTTGAAAGTCGCAACGAGAAAGAAGTAAGAGCAGATTACGACACAATGAATACTTTGCCAGTATTGAGGACCCCTTCTCCGATGGAGAGGCAAGCATCTGAGCTTTACACAAGAAAGATTTTCATGAGGTTCCAAGAGGAGTTAGTTGGCACATTAACATTCATGGCATCCAAAGCTGAGGACGATGGGGAGGTAATTACCTATAATGTAGCTAAATTTGGAGAGGATCATAAAGCATACAACGTTAGATTCAATGTTTTGGAAATGAAAGTGACTTGCAGTTGCCAAATGTTTGAGTTTTCAGGCCTTCTTTGCAGGCATATTCTGGCAGTCTTTAGAGTTACCAATGTCCTTACTCTCCCATCTCATTATATACTGAAACGCTGGACAAGAAATGCCAAGAGCAATGTCAATTTAGAAGAACATGCTTGTGATGTATATACTTACTATTTGGAATCTCACACAGTTAGATATAATACTCTCCGACATGAGGCCtttaaatttgttgataaaGGTGCAAGCTCCCCTGAAACTTATGATATTGCAAAGGATGCTTTACAAGAAGCTGCAAAAAGAGTTGCGCAGGTAACACGAAAGGAGGGGAGAACTCCCATCAGCAATGGGAAGGTCAGGAGTCACTTGCTGAATGATGAAAATCGTGCTAATTACACTAGTGGCTGCCTGGATGAAAGCTTGGGTGATCATATGAATAAGTTGTTGGAACAGAAACATGTGAATCATGGTATTGGTGTTCTTCCTTGTGAATTTCAGTCAACCAAAAAGTGCTTTGAGGATGATATGGATAAGCATATTGCAAAACTTACAAATGAGCTTGAGTGTGCAAATCGGAAATGTGAAGTTTACCGTTCCAACTTGCTCTCTGTTTTGAAAACTGTTGAGGATCACAAGTTAGAGTTGTCAGTAAAGGTGGAAAATATCAAGATAAGCATGAAAGACGGCCTCTGA 2436 0.4109 MDNEAVEFDIGLGGEYEEEPIEMEEEDDDDEEEEEEDDELDLGESSGAVYFPEAGDLEPTEGMEFESEEAAKAFYNSYARRVGFSTRVSSSRRSRRDGAIIQRQFVCAKEGFRNLNEKRTKDREIKRPRTVTRVGCKASLSVKMHDSSGKWIVSGFVREHNHELVPPDQVHCLRSHRQISGSAKTLIDTLQAAGMGPRRIMSALIKEYGGISKVGFTEVDCRNYMRNNRHRSLQGDIQLVLDYLRQMHAQNPNFFFAVQGDLDDEEHSITNVFWADPKARLNYTYFGDTVTFDTTYRSNRYRLPFAPFTGVNHHGQPVLFGCAFLINESEASFVWLFKTWLTAMSGRPPLSITTDHDSVIQSAIMQVFPNTRHRFCKWHIFKQCQEKLSHIFLQFPNFEAEFHKCVNLTDSIDEFESCWSKLLDRYALRENEWLQAIHSACRQWVPVYLRDTFFAEMSITQRSDSMNSYFDGYVNASTSLNQFFKLYEKALESRNEKEVRADYDTMNTLPVLRTPSPMERQASELYTRKIFMRFQEELVGTLTFMASKAEDDGEVITYNVAKFGEDHKAYNVRFNVLEMKVTCSCQMFEFSGLLCRHILAVFRVTNVLTLPSHYILKRWTRNAKSNVNLEEHACDVYTYYLESHTVRYNTLRHEAFKFVDKGASSPETYDIAKDALQEAAKRVAQVTRKEGRTPISNGKVRSHLLNDENRANYTSGCLDESLGDHMNKLLEQKHVNHGIGVLPCEFQSTKKCFEDDMDKHIAKLTNELECANRKCEVYRSNLLSVLKTVEDHKLELSVKVENIKISMKDGL 811
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g04240 811 Pfam FAR1 DNA-binding domain 74 166 IPR004330 -
Tsu05g04240 811 ProSiteProfiles Zinc finger SWIM-type profile. 570 606 IPR007527 GO:0008270
Tsu05g04240 811 SMART 26again6 581 608 IPR006564 GO:0008270
Tsu05g04240 811 Coils Coil 669 689 - -
Tsu05g04240 811 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 37 707 IPR031052 GO:0006355
Tsu05g04240 811 Coils Coil 754 781 - -
Tsu05g04240 811 Pfam MULE transposase domain 290 382 IPR018289 -
Tsu05g04240 811 PANTHER PROTEIN FAR1-RELATED SEQUENCE 5-LIKE 37 707 - -
Tsu05g04240 811 MobiDBLite consensus disorder prediction 1 43 - -
Tsu05g04240 811 Pfam SWIM zinc finger 559 604 IPR007527 GO:0008270
Tsu05g04240 811 MobiDBLite consensus disorder prediction 1 55 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g04240 Tsu-Chr5 52925338 52929568 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Tsu05g04240 MULE 2e-29 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g04240 - - gmx:100793442 1327.38