Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g04236 ATGAAAGGAAAGGAAATTGGAGCATCGAAATCCTATTACTATTACTATGGGATTTGCTTTGGTGGAGGTATGCTTAGTTCTGGTGTTACCCATCTCGCTATAACTCCTCTTGATGTACTCAAAGTCAATATGCAGGTTAATCCcaataaatataacaataacGGAATTCTATCCGGTCTTTCCACCATTTGGAAAGAAGAAGGTTTTTATGGTCTTTGGAGAGGTTGGTCTGCCAAATTATGTGGATACGGTATTCAGGGAGGATTCAAATATGGTCTCTATGAATATTTCAAGAACCACCTTTATGCCACCGATCTATTAAGCAGGAATTCCATATTCTTTCTCAGCGGTTTGTCTGCACAGCTTTTAGCTGATGTTACCCTCGCTCCTTTTGAAGCAGTCAAAATCCGTGTTCAAATTCAACCTAATTTCGCCAAGGGTTTGGCTGATGGCTTTCCCTTAGTATACAGAAATGAAGGTCTTGCTGGTTTCTACAGGGGCCTTATTCCATTGTGGAGCCGCAATCTTCCTTTCTCGATGGTCatgttttcaacatttgagCATTCAGTGGacctaatatataaaaatatcatgcaTAAAAGAAAGGAGAATTGTTCTACAGCACAACAACTTGGCGTGACATGCTTAGCAGCCTATGCAGCTGGTGCTGTTGGTACTGTAATTTCAAACCCTGCTGATAATGTCATGACCagtctttataaaaaaaaggctGAATCTGCTATGCAGGCTATCAAGAACATTGGGTTCATAAACCTGTTCACTAGAAGTCTTCCTATTCGCATTGCACTTCTAGGACCAGTTGTAACTTTGCAGTGGTTTCTCTATGACACTATAAAAGTACTATCTGGACTGCCTACTAGTGGAGGACTTGCAAGAGACCAGGAGGAAGTTAAATTGTAG 921 0.3833 MKGKEIGASKSYYYYYGICFGGGMLSSGVTHLAITPLDVLKVNMQVNPNKYNNNGILSGLSTIWKEEGFYGLWRGWSAKLCGYGIQGGFKYGLYEYFKNHLYATDLLSRNSIFFLSGLSAQLLADVTLAPFEAVKIRVQIQPNFAKGLADGFPLVYRNEGLAGFYRGLIPLWSRNLPFSMVMFSTFEHSVDLIYKNIMHKRKENCSTAQQLGVTCLAAYAAGAVGTVISNPADNVMTSLYKKKAESAMQAIKNIGFINLFTRSLPIRIALLGPVVTLQWFLYDTIKVLSGLPTSGGLARDQEEVKL 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g04236 306 ProSiteProfiles Solute carrier (Solcar) repeat profile. 14 100 IPR018108 -
Tsu05g04236 306 ProSiteProfiles Solute carrier (Solcar) repeat profile. 209 288 IPR018108 -
Tsu05g04236 306 PANTHER SOLUTE CARRIER FAMILY 25 (MITOCHONDRIAL CARRIER PHOSPHATE CARRIER), MEMBER 3, LIKE-RELATED-RELATED 10 304 IPR044677 GO:0005315|GO:1990547
Tsu05g04236 306 ProSiteProfiles Solute carrier (Solcar) repeat profile. 108 192 IPR018108 -
Tsu05g04236 306 Gene3D Mitochondrial carrier domain 17 290 IPR023395 -
Tsu05g04236 306 PANTHER MITOCHONDRIAL PHOSPHATE CARRIER PROTEIN 1, MITOCHONDRIAL 10 304 - -
Tsu05g04236 306 SUPERFAMILY Mitochondrial carrier 16 284 IPR023395 -
Tsu05g04236 306 Pfam Mitochondrial carrier protein 20 102 IPR018108 -
Tsu05g04236 306 Pfam Mitochondrial carrier protein 114 196 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g04236 Tsu-Chr5 52888396 52892069 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu05g04236 14 306 Chloroplast and Mitochondria Gene Families AT2G17270 67.230 4.67e-147 414
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g04236 K15102 - fve:101304339 436.417