Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g04166 ATGCCTGCTGAAAATTGGGACGGGGAAGTAGAAGCATTTGTAGAAATCGATCCAACAGGTAGATTCGGTCGTTACAATGATTTACTAGGTTATGGAGCTGTGAAAAAAGTTTACAGAGGTTTTGATCAAGAAGAAGGAATTGAAGTTGCATGGAATCAAGTTAAACTTAGGAATTTCAGTAACGATCCTGTTCTTATTAATCGTCTTCATTCTGAAGTTGAATTGTTGAGAAATCTCAGTAATAAGTATATCATTGTTTGTTATAGTGTTTGGAAAGATGATGAACATGgtaatatcaattttattactGAGGTTTGTACTTCTGGAAATCTTAGGGATTATAGGAAGAAACATCGTCATGTTTCGATTAAGGCGTTTAAGAAATGGTCGAAACAAGTTCTTGAAGGATTGGAGTATCTTCATACACATGATCCTTGCATTATTCATAGAGATCTTAATTGCAGTAATATCTTTGTTAATGGGAACATTGGACAGGTGAAAATTGGTGATCTGGGATTGGCTGCAATAGTGGGAAGGAGCCATGCAGCACATTCAATTTTGGGGACTCCTGAGTATATGGCACCTGAGCTGTATGAGGAAGATTACACTGAGATGGTTGACATTTACTCTTTTGGAATGTGTTTGCTTGAAATGGTTACAATGGAGATACCATACAGTGAATGTGACAATGTAGCAAAGATATACAAAAAAGTCACATTGGGAATTAAGCCTCAAGCCTTAAGCAATGTCAGAGATCCAGAAGTGAAAGCATTCATTGAAAAATGCATTGCTCAGCCAAGGGCAAGACCTTCAGCCACTGATCTTCTTAAGGATCCTTTCTTTTCTGAACTCAACAATGATGAAGAATCAACATCTCTCAGTACTTGA 888 0.3671 MPAENWDGEVEAFVEIDPTGRFGRYNDLLGYGAVKKVYRGFDQEEGIEVAWNQVKLRNFSNDPVLINRLHSEVELLRNLSNKYIIVCYSVWKDDEHGNINFITEVCTSGNLRDYRKKHRHVSIKAFKKWSKQVLEGLEYLHTHDPCIIHRDLNCSNIFVNGNIGQVKIGDLGLAAIVGRSHAAHSILGTPEYMAPELYEEDYTEMVDIYSFGMCLLEMVTMEIPYSECDNVAKIYKKVTLGIKPQALSNVRDPEVKAFIEKCIAQPRARPSATDLLKDPFFSELNNDEESTSLST 295
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g04166 295 ProSiteProfiles Protein kinase domain profile. 23 281 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu05g04166 295 CDD STKc_WNK 21 281 - -
Tsu05g04166 295 Gene3D Transferase(Phosphotransferase) domain 1 106 287 - -
Tsu05g04166 295 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 4 285 - -
Tsu05g04166 295 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK11-RELATED 4 285 - -
Tsu05g04166 295 Pfam Protein kinase domain 27 281 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu05g04166 295 Gene3D Phosphorylase Kinase; domain 1 8 104 - -
Tsu05g04166 295 SUPERFAMILY Protein kinase-like (PK-like) 16 281 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g04166 Tsu-Chr5 52286384 52288820 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu05g04166 7 281 MAP Kinase Kinase Kinase AT5G55560 77.091 1.62e-168 468
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Tsu05g04166 Pkinase 9e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g04166 K08867 - gmx:100798280 550.436
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu05g04166 05 52286384 52288820 Tsu05g04166 05 52286384 52288820 ECH