Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g04165 ATGCAGGCATCGGAGCAACATAGAAGTTCGAGTATGTACTATCAACCATTGCAACAAATGGAAGCCTATTGCTTGCCACAGTATCGAAATCTAAACCATCAGCTATTCAACAATGATGGAGGCCACGGAACTCAATTACCGGCTCCAAGTTCGTCTGACCTATATTACTGCACATTGGAGTCGTCTTCAGCAACTGGAAATTTTGCCGTTTACAACTCTCCTTCAACTGTTAGTTTCTCGCCTAACGATAGTCCAATGTCGCAGCAAGATTCACAGTCATATCCATCTGATAAGTATCATTCCCCCGATAATACCTATGGCTCTCCAATGAGTGGATCGTGCATAACCGAAGATTTAAGTAGTTTTAAGCACAAGCTGAGAGAATTGGAAAATGTAATGCTTGGTCCTGACTCTGATAATCTTGATAGTTACGACAGTGCCATGAGCAATGGAACCAATTTCGTTTCGCTTGAAATGGATAGTTGGAGACAAACAATGGTAGCGATTTCGAGCAAAAATCTAAAGCATATCCTTACTGCATGTGCCAAAGCAATTGCAGACAATGATTATCTAATGGCACAGTGGCTGATGGACGAATTAAGGCAGATGGTATCGGTTTCTGGCGAACCGATTCAAAGGTTGGGAGCATACATGTTGGAAGGACTCGTTGCACGGTTGTCTTCCTCTGGGAGTTCAATCTACAAATCATTAAGATGCAAAGAACCGGAAAGTGCCGAGCTTCTTTCTTACATGAACATACTTTATGAGGTTTGCCCTTACTTCAAATTCGGATACATGTCTGCAAACGGAGCCATTGCAGAAGCAATGAAAAATGAAGCCAGAGTTCATATTATTGATTTCCAAATAGCTCAAGGAAGCCAATGGATTTCGTTGATTCAAGCTTTTGCAGCTAGGCCTGGTGGGCCACCTCACATCCGCATTACAGGCATCGATGATTCGACCTCAGCTTATGCCCGTGGAGGTGGACTACATATAGTTGAAAAGAGGTTATCAAAGCTTGCTCAGCATTTCAAGGttccatttgaatttcatgCCGCGGCTATCTCCGGTTGTGATGTTCAACTGCATAACCTTGGAGTTCGACCTGGGGAAGCACTTGCGGTAAATTTTGCATTCATGCTACATCACATGCCTGATGAGAGTGTCAGCACTCAGAATCATAGAGATAGGCTTCTGAGGTTAGTTAAGAGCCTGTCACCAAAAGTCGTGACACTTGTTGAGCAAGAATCTAACACAAACACTGCGGCATTCTTTCCGCGTTTCCTTGAAACTATGGACTATTACACGGCAATGTTTGAGTCAATAGATGTGACTCTTCCGAGAGAGCATAAAGAGAGAATCAATGTTGAGCAGCATTGCTTGGCAAGAGACTTAGTTAACATCATAGCTTGTGAAGGGGTCGAGAGAGTGGAACGACACGAACTGCTAGGGAAATGGAGATCAAGATTTGCAATGGCTGGTTTCACTCCTTACCCTTTGAGTTCATTGGTGAATGGTACCATAAAGAAATTGCTTGAAAATTACAGTGATAGATATAGACTTCAAGAGAGAGATGGAGCCTTATACCTTGGTTGGATGAATAGAGATTTGGTTGCTTCTTGTGCTTGGAAATGA 1635 0.4251 MQASEQHRSSSMYYQPLQQMEAYCLPQYRNLNHQLFNNDGGHGTQLPAPSSSDLYYCTLESSSATGNFAVYNSPSTVSFSPNDSPMSQQDSQSYPSDKYHSPDNTYGSPMSGSCITEDLSSFKHKLRELENVMLGPDSDNLDSYDSAMSNGTNFVSLEMDSWRQTMVAISSKNLKHILTACAKAIADNDYLMAQWLMDELRQMVSVSGEPIQRLGAYMLEGLVARLSSSGSSIYKSLRCKEPESAELLSYMNILYEVCPYFKFGYMSANGAIAEAMKNEARVHIIDFQIAQGSQWISLIQAFAARPGGPPHIRITGIDDSTSAYARGGGLHIVEKRLSKLAQHFKVPFEFHAAAISGCDVQLHNLGVRPGEALAVNFAFMLHHMPDESVSTQNHRDRLLRLVKSLSPKVVTLVEQESNTNTAAFFPRFLETMDYYTAMFESIDVTLPREHKERINVEQHCLARDLVNIIACEGVERVERHELLGKWRSRFAMAGFTPYPLSSLVNGTIKKLLENYSDRYRLQERDGALYLGWMNRDLVASCAWK 544
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g04165 544 PANTHER SCARECROW-LIKE TRANSCRIPTION FACTOR PAT1 15 544 - -
Tsu05g04165 544 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 15 544 IPR005202 -
Tsu05g04165 544 MobiDBLite consensus disorder prediction 77 107 - -
Tsu05g04165 544 Pfam GRAS domain family 174 544 IPR005202 -
Tsu05g04165 544 ProSiteProfiles GRAS family profile. 165 544 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g04165 Tsu-Chr5 52276375 52279563 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu05g04165 12 544 GRAS Transcription Factor Family AT5G48150 65.677 0.0 700
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Tsu05g04165 GRAS 9e-137 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g04165 - - gmx:100808300 990.719
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu05g04165 05 52276375 52279563 Tsu05g04165 05 52276375 52279563 ECH