Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g04141 ATGGAAGCAAATAAAGAGGAAGCACGTAAGGCAATAGAGAGTGCCGAGAAGAGATTTGCTCAGAGAGACTTTGCAGGCGCGAAAAACTATGCTTTAAAGGCGAAAACACTTTGTCCTGAGTTGGAGGGTATATCTCAAATGGTGTCCACATTTGAAGTTTACATTGCTTCTGAGTTCAGACATAATGGTGACCTCGATTATTATTCGGTTCTCGGACTAAAACCTACTGCAGATAAAGAAGCTGTGAAAAGACAATACAAGAAGTTGGCGGTGTTGCTTCATCCAGATAAGAACAAATGTGTCGGAGCTGATGGTGCGTTTAAGCTTGTTTCCGAGGCGTGGACTTGGCTTGACAATGCCATGCGTAGTTCTTACGATCGCAAGAGAAATTATGCTTCTTTTCATGCTACAGGTTATAACAAATGTTCTAATTTGTCGGCCTCTCGTAATAGACTAGACACGTTTTGGACAATTTGTACTTCTTGTAAGGTTCAGTATGAGTATCTGCGTAAGTATGTGAATAAAAAACTCTCATGTAAGAACTGCCGTGGCATTTTCATTGCTGTTGAAACGGGAGCAGCCCCAGCAAATGGTTCGTTTCCATATACTCCTTTGCCATATGTGCCGGGAAATGGTTATGGAAATCATTCATTTGACGGGGTTACATATGTTCCTACTAATGCTACCTATTTTAATGGGAATGGTGTAGCAGGATACCATTCTGGACATGGTTACGAGTATGTTTCAAATGTTTCGTTTCAGTTGGGCTCTGCCGGACTTATCCATCAAAATGGATCAGGCACTACCTTACCTGCTGGTTCCATTTATCGGGTCAACGGACATTCGAAGAGGGGAAGACCAAAGGTCAAACCAGGTGTCAATGGAAGGCATCCTATGGAGGAGGCTATGGTCAATATAAACTCACATGTATCTTTCTCCGGTAATGAACCACAGGAAGTTAAGCCAGGTAGACCTGAAAAGAAACACAAACTTAGTGTGGGATCCGATTTCAGAAATGGCTATGTCGAGAAGGGGTCAAAATGTGCTTCAGAAGCAGTAGTGTCAAATGGCCAGAAGGTTTCCTGTGTAAATGAAATTCAAACCAAACATTGTTTTATTCCACCTGCATTTGATGCGAGAAAATTATTGATTGAGAAAGCCAGGACAGTTATTAGGAAGAAACTCGAAGAGATGAAGCTGTCAGCTGAAGCTACAACTCTGAACGAGAAAGAAAAGGCACCAGCTGATGTTTGTCCGGTCAAAAAAGAGACATGTAGGAGAGCACCTCAGAATGTTTCTGTTCTTCCGTTGGAGCAAGGAAAAGTCAATCCGATCTCAATAACTGTCCCTGATTCTGACTTTCATGACTTCGATAAAGATCGGACAGAGGAATGTTTCAAGCCAAAGCAAATATGGGCCTTATATGATGAGGAAGATGGAATGCCACGATTGTATTGTCTGATCCGCGAGGTTATATCTGTTAATCCATTTAAGATTCATATCAGTTACTTGAATTCCAAAACTGATAGCGAATTCGGCTCAGTAAACTGGCTTGAATCAGGTTTTACCAAATCCTGTGGAAATTTTAGGGCTTGGACTTCAGATATTGTCGACCAAGTTAACATATTTTCTCATGTTCTAAGCCGGGAGAAAGCTGGTCGAGGTGGTTGTGTTCGCATATATCCAAGAAGTGGAGATATTTGGGCTGTTTATCGAAATTGGTCACCAGATTGGAACCGATCTACACCGGACAAAGTAAGGCATGAATATGACATGGTGGAGGTGCTGTATGATTACTCCGAGGATCTCGGTGTTTGTGTTTGTCCCCTTATTAAATTATCTGGATTTAAAACAGTATACAAAAGGAATTCTGACAACGGTGCCGAAAGATGGATACCAAGAAGAGAAATGGTACGCTTTTCACACCAAGTTCCTTATTGGTTGCTGAAAGGAGAGGAAAGCAATTTGCCCGATCGGTGTTTTGACCTTGATCCAGCTGCAACTCCAGACGGGCTTCTTCATACTGCTACTACAGAAGGAAATGCTTTATTCTTCAACATCATTCCCCAAAGAAGCACTTCCTACAAAATCAGGTTATCTACCAGTGGCCCTGGTTGCTCTTCCATGGTTGGCAACTTCTATGAACTTGGACCATATCTTATCACCAATTCACTCACCCTTCAACCTAACCATGCTTCTTGGAATAGAATCTTTGGTCTTCTTTTTCTAGATAATCCCATTGGAACTGGCTTCAGTGTAGCTTCAACCCTACAAGAGATTCCAACCGATCAAACCGCGGTTGCAGAACATCTTTTCGTGGCTATAACAAGGTTTGTTAAACTTGATCATCTTTTTAAACATCGTCCTATTTATATAACTGGTGAAAGTTATGCCGGAAAGTATGTTCCTGCAATTGGTTACtatattttagagaaaaatGCTAAGTTGAAAGACTTTGAGAGAGTGAATTTAGCTGGTGTTGCAATTGGTAATGGTTTAACAGATCCTGTGACACAAATGGTTACTCATGCTGATAATGCTTATTATGTTGGATTGATCAATGAGAGGCAAAAAAATGAGTTGGTAAAAGCTCAAGTTGAAGCTGTTGAGTTGGTAGAGAGAAGGAATTGGAGTGAAGCAACTGATGCGCGAAACCATGTCTTGAATTTGTTGCAAAATATGACAGGGTTAGCTACTTTGTATGATTATTCGCGGAAAATTCCTTATGAGGACTATTTGGTTGCGAATTTCTTGAATATCGATGAGGTGAAGAAGGCCTTAGGAGTGAATGTTGATGAATCATTTGTTTATGAGAAATGCAGTCACGTCGTTGGAGCTGCATTACATGCTGATTTGATGAAAAGTGTAAAGTATATGGTAGAGAAATTATTGAAGGAGGGGATGAGGGTTTTATTGTATCAAGGTCAGCGCGATTTGAGGGTCGGTGTGGTTCAAGTAGAGGCTTGGGTGAAGACTATGAAGTGGGAAGGGATTGTTGATTATGTGAACGCGGAGAGGGAGGTTTGGAAGGTAAATGGAGAGGTAGCCGGTTATGTACAAAAATGGAAGTCATTTACTAATGTTGTGGTTTTAGGGGGTGGGCATCTTTTGCCTACTGATCAACCTTTGAATTCTCAAGCTATGATTGAAGATTGGGTTTTGGAAAAGGGTTTGTTTGGAAGTGTGTTGTACTCAAATGTATCCACAAATTCTTTGTATGATGGGTGA 3228 0.4095 MEANKEEARKAIESAEKRFAQRDFAGAKNYALKAKTLCPELEGISQMVSTFEVYIASEFRHNGDLDYYSVLGLKPTADKEAVKRQYKKLAVLLHPDKNKCVGADGAFKLVSEAWTWLDNAMRSSYDRKRNYASFHATGYNKCSNLSASRNRLDTFWTICTSCKVQYEYLRKYVNKKLSCKNCRGIFIAVETGAAPANGSFPYTPLPYVPGNGYGNHSFDGVTYVPTNATYFNGNGVAGYHSGHGYEYVSNVSFQLGSAGLIHQNGSGTTLPAGSIYRVNGHSKRGRPKVKPGVNGRHPMEEAMVNINSHVSFSGNEPQEVKPGRPEKKHKLSVGSDFRNGYVEKGSKCASEAVVSNGQKVSCVNEIQTKHCFIPPAFDARKLLIEKARTVIRKKLEEMKLSAEATTLNEKEKAPADVCPVKKETCRRAPQNVSVLPLEQGKVNPISITVPDSDFHDFDKDRTEECFKPKQIWALYDEEDGMPRLYCLIREVISVNPFKIHISYLNSKTDSEFGSVNWLESGFTKSCGNFRAWTSDIVDQVNIFSHVLSREKAGRGGCVRIYPRSGDIWAVYRNWSPDWNRSTPDKVRHEYDMVEVLYDYSEDLGVCVCPLIKLSGFKTVYKRNSDNGAERWIPRREMVRFSHQVPYWLLKGEESNLPDRCFDLDPAATPDGLLHTATTEGNALFFNIIPQRSTSYKIRLSTSGPGCSSMVGNFYELGPYLITNSLTLQPNHASWNRIFGLLFLDNPIGTGFSVASTLQEIPTDQTAVAEHLFVAITRFVKLDHLFKHRPIYITGESYAGKYVPAIGYYILEKNAKLKDFERVNLAGVAIGNGLTDPVTQMVTHADNAYYVGLINERQKNELVKAQVEAVELVERRNWSEATDARNHVLNLLQNMTGLATLYDYSRKIPYEDYLVANFLNIDEVKKALGVNVDESFVYEKCSHVVGAALHADLMKSVKYMVEKLLKEGMRVLLYQGQRDLRVGVVQVEAWVKTMKWEGIVDYVNAEREVWKVNGEVAGYVQKWKSFTNVVVLGGGHLLPTDQPLNSQAMIEDWVLEKGLFGSVLYSNVSTNSLYDG 1075
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g04141 1075 PRINTS Carboxypeptidase C serine protease (S10) family signature 1025 1038 IPR001563 GO:0004185|GO:0006508
Tsu05g04141 1075 PRINTS Carboxypeptidase C serine protease (S10) family signature 730 742 IPR001563 GO:0004185|GO:0006508
Tsu05g04141 1075 PRINTS Carboxypeptidase C serine protease (S10) family signature 778 803 IPR001563 GO:0004185|GO:0006508
Tsu05g04141 1075 PRINTS Carboxypeptidase C serine protease (S10) family signature 743 753 IPR001563 GO:0004185|GO:0006508
Tsu05g04141 1075 ProSiteProfiles dnaJ domain profile. 66 129 IPR001623 -
Tsu05g04141 1075 Gene3D DnaJ domain 56 146 IPR036869 -
Tsu05g04141 1075 SUPERFAMILY Chaperone J-domain 59 130 IPR036869 -
Tsu05g04141 1075 Coils Coil 854 874 - -
Tsu05g04141 1075 Pfam DnaJ domain 66 126 IPR001623 -
Tsu05g04141 1075 Gene3D alpha/beta hydrolase 661 1059 IPR029058 -
Tsu05g04141 1075 SUPERFAMILY alpha/beta-Hydrolases 677 1054 IPR029058 -
Tsu05g04141 1075 CDD DnaJ 66 114 IPR001623 -
Tsu05g04141 1075 PRINTS DnaJ domain signature 68 86 IPR001623 -
Tsu05g04141 1075 PRINTS DnaJ domain signature 102 122 IPR001623 -
Tsu05g04141 1075 PRINTS DnaJ domain signature 86 101 IPR001623 -
Tsu05g04141 1075 Pfam Serine carboxypeptidase 671 1053 IPR001563 GO:0004185|GO:0006508
Tsu05g04141 1075 PANTHER BNAC03G44070D PROTEIN 1 676 - -
Tsu05g04141 1075 MobiDBLite consensus disorder prediction 313 332 - -
Tsu05g04141 1075 Pfam Domain of unknown function (DUF3444) 446 653 IPR024593 -
Tsu05g04141 1075 PANTHER BNAC03G44070D PROTEIN 1 676 - -
Tsu05g04141 1075 SMART dnaj_3 65 122 IPR001623 -
Tsu05g04141 1075 ProSitePatterns Serine carboxypeptidases, serine active site. 792 799 IPR018202 GO:0004185
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g04141 Tsu-Chr5 52105037 52110056 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu05g04141 4 291 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 29.936 6.71e-28 114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g04141 - - gmx:100792639 1094.34
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu05g04141 05 52105037 52110056 Tsu05g04141 05 52105037 52110056 ECH