Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g04110 ATGTCTTCCtttatttttcaacttattATTTCATCTTTTCTTGTTTGCACTTTCTTCTTGCAATTGCAACCATCCTATGCCATTGGAAAGTCTTATGTTGTTTACTTAGGAGCACATTCTCATGGCCTAAATCCATCTTCTTCTGATTTAGACTATGCAACAAATTCCCATTATAGCTTATTGAGCTCTATCCTAGGGAGCCATGAGAGAGCCAAGGATGCAATATTCTACTCCTATAATAGACACATCAATGGTTTTGCAGCAATATTGGAAGAAAAAGAAGCAGAAGAGCTTGCAAGAAATCCAAATGTAGTTTCTGTATCTTTGAACAAAATGCATCAATTGCATACAACAAGGTCATGGGAATTTCTTGGACTAGAAGGAAATGGAATATTTCCTAAGTACTCCTCCATTTGGGAGAAAGCAAGATATGGTGAAGATACAATCATTGGTAACCTTGATACAGGTGTATGGCCCGAATCGCAAAGCTTTAGTGACCAAGGAATGAGCCCTATTCCATCAAAGTGGCGCGGAAATGGGATATGCCAAatcgacaattttttttactcccACAAAACTTATTGCAACAGAAAGCTTATAGGAGCAAGATTTTTCTACAAAGGTTATGAGGCATATGCAGGCAAACTTGGTGCATCATTTTACACCGCACGGGACACGATAGGCCATGGTTCTCACACTCTATCAACAGCTGGAGGTAATTTTGTTCAAGGAGTAAGTGTTTTTGGCAATGGTAATGGCACTGCAAAAGGTGGATCTCCAAAGGCTCGTGTTGCGGCCTACAAAGTGTGTTGGGCACGAGGCTGCAATAGTGCAGATATCTTAGCAGGTTTTGAGGCTGCCATAAGTGATGGTGTTGATGTGCTTTCAGTTTCTCTTGGAGGAAAGACTAAAAATCTGTTTTCAGATCCAGTTGCTATAGGTTCCTTCCATGCAGTTGCAAATGGTATAGTAGTAATTAGTTCTGCTGGAAATGAAGGACCTTATTTTGAAACTGTTGTAAATATGGCACCTTGGTTATTCACTGTTGCCGCTAGCACAATCGATAGAGACTTCACCAGTTATGTTAAACTAGGTGACAACATGTACATTAAGGGAACAAGTCTTTCATCTAAGGACTTGCCATCGGACGAGTTCTATCCTTTGATTAGTGCTAAAGATGCCAAACATTTCTATGTTCTATCTAGAGAAGCGAAATTCTGCAGATATGGAACTCTTGATGCTGAAAAGGCGAAGGGAAAAATAGTGGTATGCCTTGAAGATGAATTATTTGGAATTCCAAATGTAGGTGCAGATGCAGAAGTTTCTTCTGCAGGAGCAGTAGGAATGATTTTGGCTAGTGATTATAAGAGCTTTTATGATTTTACTGCATACCCTCATGTTTTGCCTACTTCACATGTCAATTATTCTGATGGTCAATATATTTATTCCTATATCCAAAgtgaaaaTAATCCTGTTGCTTACATAACAAAAGCTACAACAGAAATTCCAATTATTCCAGCTCCAGTGATTGCTTCATTTTCATCAAGGGGTCCTAGCACAATTCTTCCATCAATTCTaaaaCCTGATATCACTGCACCTGGAGTGAATATAATTGCTGCTTACTCAGAAGCCACGAGTGTATTTGAAAGAGAATCAAATAACAGGATTCCATATAATTCCTTTTCTGGAACTTCTATGTCATGCCCTCATGTGTCCGGCATAGTAGGTCTTCTCAAAACACTTCATCCTGAATGGAGTCCGGCAGCTATCAAATCAGCAATTATGACCACCGCAAGCAAAATGGACAACAGCAAAAGACCTATCCAGGATCGATTCTACGAAAATGCAACTCCATTTGCATATGGTTCGGGTCACATTCAGCCTGATCTTGCTATAGACCCCGGACTAATTTATGATCTTAATGTGGTAGATTACTTGAACCTATTATGTGCTTATAACCAAAGCCATAAACAAATTAAGGCTATGTACAACAAGCCTTTCATTTGTCCAAACTACTACAATGTGTTGGATTTCAACTACCCTACAATCACAATACTTGATCTAGAGGACAAAACCGTAAATGTTAGTCGAACCGTTACAAATGTTGGACCTTCAAGTATATATAGCGTGCAAGCCAAGGCACCTGATGGAGTTTCAGTTATGGTTGAGCCAAGTTACTTGAGCTTTAAGGAAGTTGGTGAGAAAAAATCATTCAAGGTTATTGTGATGAAAAATATGGATTATGGTGATGGTGTTTCTACTACATTGGATTATGTATTTGGGGAATTATTGTGGACAAATGGAAAGCATAGAGTAAGGAGTACTATTGCAGTGAAGTTCAAGTAG 2346 0.3832 MSSFIFQLIISSFLVCTFFLQLQPSYAIGKSYVVYLGAHSHGLNPSSSDLDYATNSHYSLLSSILGSHERAKDAIFYSYNRHINGFAAILEEKEAEELARNPNVVSVSLNKMHQLHTTRSWEFLGLEGNGIFPKYSSIWEKARYGEDTIIGNLDTGVWPESQSFSDQGMSPIPSKWRGNGICQIDNFFYSHKTYCNRKLIGARFFYKGYEAYAGKLGASFYTARDTIGHGSHTLSTAGGNFVQGVSVFGNGNGTAKGGSPKARVAAYKVCWARGCNSADILAGFEAAISDGVDVLSVSLGGKTKNLFSDPVAIGSFHAVANGIVVISSAGNEGPYFETVVNMAPWLFTVAASTIDRDFTSYVKLGDNMYIKGTSLSSKDLPSDEFYPLISAKDAKHFYVLSREAKFCRYGTLDAEKAKGKIVVCLEDELFGIPNVGADAEVSSAGAVGMILASDYKSFYDFTAYPHVLPTSHVNYSDGQYIYSYIQSENNPVAYITKATTEIPIIPAPVIASFSSRGPSTILPSILKPDITAPGVNIIAAYSEATSVFERESNNRIPYNSFSGTSMSCPHVSGIVGLLKTLHPEWSPAAIKSAIMTTASKMDNSKRPIQDRFYENATPFAYGSGHIQPDLAIDPGLIYDLNVVDYLNLLCAYNQSHKQIKAMYNKPFICPNYYNVLDFNYPTITILDLEDKTVNVSRTVTNVGPSSIYSVQAKAPDGVSVMVEPSYLSFKEVGEKKSFKVIVMKNMDYGDGVSTTLDYVFGELLWTNGKHRVRSTIAVKFK 781
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g04110 781 Pfam Subtilase family 145 609 IPR000209 GO:0006508|GO:0008236
Tsu05g04110 781 Gene3D Peptidase S8/S53 domain 147 645 IPR036852 GO:0004252|GO:0006508
Tsu05g04110 781 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 27 778 IPR045051 -
Tsu05g04110 781 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 21 116 IPR037045 -
Tsu05g04110 781 PANTHER SUBTILISIN-LIKE PROTEASE SBT5.3 27 778 - -
Tsu05g04110 781 Gene3D - 649 780 - -
Tsu05g04110 781 Pfam PA domain 406 480 IPR003137 -
Tsu05g04110 781 Gene3D - 355 502 - -
Tsu05g04110 781 ProSiteProfiles Serine proteases, subtilase domain profile. 120 632 - -
Tsu05g04110 781 Pfam Peptidase inhibitor I9 31 116 IPR010259 -
Tsu05g04110 781 CDD PA_subtilisin_like 361 495 - -
Tsu05g04110 781 Pfam Fibronectin type-III domain 677 778 IPR041469 -
Tsu05g04110 781 ProSitePatterns Serine proteases, subtilase family, serine active site. 563 573 IPR023828 -
Tsu05g04110 781 PRINTS Subtilisin serine protease family (S8) signature 225 238 IPR015500 -
Tsu05g04110 781 PRINTS Subtilisin serine protease family (S8) signature 562 578 IPR015500 -
Tsu05g04110 781 PRINTS Subtilisin serine protease family (S8) signature 145 164 IPR015500 -
Tsu05g04110 781 SUPERFAMILY Subtilisin-like 115 636 IPR036852 GO:0004252|GO:0006508
Tsu05g04110 781 CDD Peptidases_S8_3 113 599 IPR034197 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g04110 Tsu-Chr5 51785828 51789866 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu05g04110 31 780 Subtilisin-like Serine Gene Family AT2G04160 53.307 0.0 783
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g04110 - - vvi:100251507 884.019
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu05g04110 05 51785828 51789866 Tsu05g04110 05 51785828 51789866 ECH