Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g04109 ATGAATGATTATGCATACAAAGTTGAAAGCATGAATCGTTTAGTTCAATGGAGAGTTCATAATTTATCAACATGCACTTATATGAAAACTGATCCATTCAAAATAGCTATGTGGAATTGGCATTTATCAGTGGAAAAGAATTGTGGTTTACGTATTGAATTATATCCAGAAATGTCCAAAGAAAATTCTTCTCCAATTGCATCTTTCATAATTAGGATTCTTAGTTATGGTGCAAATAGCAAAATCTTGACTCAATCAGaaataaaagataaagttcTTAGCAATAAGGATTGTTTTGTTTGGGATATTGAGGTTCCATTACCTGGAAAATTTATAATTGACATTGAGTTTCTTGATTTGAAAACTATATGTACAAAGgGTGAGGAAGCTTGTTCTATTTGGTCTAATGGATTTATACAGAAAATACAAAATGCAACGGCACTTGAATCGCTCGGTCGAATGATAAGAGAAGGTATCTATACCGACATAACAATCAACGTCAATTCTGAGGGAAGTATAAAAGCTCATCGAGCTATTCTTGCTTCACAATCACCTGTTTTTCGGAGCATGTTTTCGCATAATGTTAAGGAGACAGATTTGTCTATCATAAACATCGAAGACATGTCAATTGAAGCTTGTcaaacatttataaattttctataTGGAACCGTCAATGATGACAAATTTCTTATGCATAGATTAGACCTATTGCATGCCGCGGATAAGTATGATATCCATGACTTGAGAGAAGCGTGTCAAAAGAGTCTTCAAGAAGATATTGACGCGAAAAATGTACTCGAGAGACTTCAACTTGCATCTTTCTATGGATTAACAAAGCTGAAGATTAGTTGTATGCAATATCTTGTGaaatttggtaaaatatatgATGTTCAAGGTGATTTAACTACCTTCTTGCAAACTGCAGATAGAGATTTGATATGTGAAGTCTTTCACCAAATTCTTGATGCAAGGAAAAAGTAA 981 0.3221 MNDYAYKVESMNRLVQWRVHNLSTCTYMKTDPFKIAMWNWHLSVEKNCGLRIELYPEMSKENSSPIASFIIRILSYGANSKILTQSEIKDKVLSNKDCFVWDIEVPLPGKFIIDIEFLDLKTICTKGEEACSIWSNGFIQKIQNATALESLGRMIREGIYTDITINVNSEGSIKAHRAILASQSPVFRSMFSHNVKETDLSIINIEDMSIEACQTFINFLYGTVNDDKFLMHRLDLLHAADKYDIHDLREACQKSLQEDIDAKNVLERLQLASFYGLTKLKISCMQYLVKFGKIYDVQGDLTTFLQTADRDLICEVFHQILDARKK 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g04109 326 CDD BTB_POZ_ZBTB_KLHL-like 160 243 - -
Tsu05g04109 326 PANTHER OS08G0495500 PROTEIN 1 325 - -
Tsu05g04109 326 SMART BTB_4 161 260 IPR000210 GO:0005515
Tsu05g04109 326 ProSiteProfiles BTB domain profile. 161 221 IPR000210 GO:0005515
Tsu05g04109 326 SUPERFAMILY POZ domain 146 258 IPR011333 -
Tsu05g04109 326 PANTHER OS08G0495500 PROTEIN-RELATED 1 325 IPR044714 -
Tsu05g04109 326 Pfam BTB/POZ domain 156 258 IPR000210 GO:0005515
Tsu05g04109 326 Gene3D Potassium Channel Kv1.1; Chain A 136 290 IPR011333 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g04109 Tsu-Chr5 51781085 51782930 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Tsu05g04109 BTB 3.3e-23 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g04109 K10523 - gmx:100790186 428.328
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu05g04109 05 51781085 51782930 Tsu05g04109 05 51781085 51782930 ECH