Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g04106 ATGAAATGGAAGGGGGTGAGAAAAGGAGTGTCAAAGAATTTCGGAACTGGGTTTGTTGCTTGTCCTAGAGAGTTTGATTACAGAGAATTGACTTCTGCGACACGAGAGTTTCATCCTAGTAGGATCGTTGGTCATGGTTCGTTTGGTACTATGTATAAAGCTTTCTTTATATCTTCTGGAACCATTGCTGCAGTGAAAATATCGAGGCATTCTCATGAAGGAAAAACCGAGTTTCTTTCTGAATTGTCTATCATTGCTTGTTTAAGGCACAAAAATTTGGTTCAGTTGAGAAAGGAGAGTTGCTTCTTGTTTATGAGTTCATGCCTAATGGAAGCTTAG 339 0.3923 MKWKGVRKGVSKNFGTGFVACPREFDYRELTSATREFHPSRIVGHGSFGTMYKAFFISSGTIAAVKISRHSHEGKTEFLSELSIIACLRHKNLVQLRKESCFLFMSSCLMEA 112
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g04106 112 PANTHER - 10 101 - -
Tsu05g04106 112 ProSiteProfiles Protein kinase domain profile. 37 112 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu05g04106 112 Gene3D Phosphorylase Kinase; domain 1 8 100 - -
Tsu05g04106 112 SUPERFAMILY Protein kinase-like (PK-like) 21 97 IPR011009 -
Tsu05g04106 112 PANTHER L-TYPE LECTIN-DOMAIN CONTAINING RECEPTOR KINASE S.7-RELATED 10 101 - -
Tsu05g04106 112 Pfam Protein kinase domain 38 97 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g04106 Tsu-Chr5 51768788 51769126 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu05g04106 2 97 Receptor kinase-like Gene Family AT5G55830 61.856 2.00e-34 122
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Tsu05g04106 Pkinase 3.3e-09 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g04106 - - lja:Lj2g3v3302440.1 149.058