Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g04097 ATGCCTCAGGAGAGTAGCTTATTAAGCTCAATTTTCGCATCTCCTGCATCGAAGAGGATATTGAATTTGAAGGGTTCGTTTTTTAACAATAGTGAGGTGAATGAGGAGATCAATGATCATGAATTAGCTTACAGGAAAGCAGAGGAAGCAGCATCAAGGAGGAATGAAGCAGCAGAATGGCTTCGAGAAATGGACGAAGTGGCTTATTCGTCACTCTCCAAACAACCTTCCGAAGAACAATTCTGTCTCGCCCTCCGCAATGGTCTCATTCTCTGCAACGTGCTCAACAAAATCAATCCCGGTGCTATCCTCAAGGTGGTGGACAATCAAGTCCTTGCAGTTCACTCTCCAGAAGGACCAGCCCACTCTGCCATTCAATATTTCGAAAACATGAAGAATTTTCTTGATGCTGTTAGGGATATGACCCTTTTAACCTTTGAAGCTTCTGATTTGGAAAAGGGTGGTTCATCAAGCAAAGTTGTAGACTGCATTCTTTGTTTGAAAGGGTATTATGAATGGAAGCTATCAGGTGGAGTTGGGGTTTGGAGGTATGGAGGAACTGTCAGGATTACTTCTTTCCCCAAGGAAACTCCTTCTTCATCTATTTTGGGCAGTGAAAGTATTGATGAGTCCCTTGATGAATCTCAGTCCTCACAGTATGAACAATTGCTTGAATTTCTTCGTATGTCTCAAGAGGTCTCAATCGAAGAAACCAGAACTGCTAGTGCGCTGGCTTTCCTGTTTGATCACTTTGGACTCAAACTTCTCCGGGCTTTCGTTAGAGAGATTGATGATGGGATTGAAGATCTACCACTCAATGCAATGGTAATTGATACATTTCTCAGCAAGATAGTAAGGGATTTCTCCACATTACTTGTTTCTCAAGGCACTCAGCTTGCATTTTTCCTCAAGAAAATATTGAAAGGCGATAATGGTTGTCTCTCTAAGAAAGAATTCATGGAAGCTATCGCATTATATCTTAATCAAAGAAGTAGTTTGTCGTCAAATGATATATCTAAATTCTGCATTTGTGGGGGAAAACGTGATAGTAATGCTCAAAATAATGTCAAATTTTCATCCAAGTATGCTGAAATAATTGATGCGCAGCAGAAACAACTTGAGGGAATGAGATACTTACTAGAGGAGATAAAAAAGGAAGTCAAACAGATTCAATTTCAATGGGACCAAGAATCGAGCAGGCTCGAGAATCATATAAAGAGCCTTGAGGCGACCTCCTCTTCCTACCACAAAGTTTTAGAGGAGAACCGATCTCTTTACAATCAAGTGATAGACCTCAAAGGATCCATTAGGGTCTATTGTAGAGTGAGACCCTTCTTAGGACAATCAAATGGACAATCTACAGTGGATTATATAGGAGAAAATGGGAACATAATGATCTTGAATCCCCTTAAGCAAGGAAAAGATGCTAGAAAAgtattttcattcaataaagTGTTCGCAACTAATGCCACACAAGAACAAATATATTCCGATACAAAACCATTGGTTAGATCTGTTTTAGATGGCTATAACGCATGCATCTTTGCATATGGACAGACTGGCTCAGGGAAGACCTACACGATGAGTGGTCCGGATTTGATGACAGAAGAGACATGGGGTGTTAACTATAGGGCGTTGCGTGACTTATTTCATATATCAAAGGAAAGAGCAGATGCAATAAACTATGAAGTTGCCGTCCAAATGATCGAAATATACAATGAACAAGTGAGAGATTTATTAGTCAGTGATGGCTCTAACAGAAGATTAGATATACGAAACAACTCTCAATTGAACGGTCTTAATGTGCCTGATGCATGTTTGGTTCAGGTTAGTTGTACTCAAGATGTTCTTGATTTAATGAAAATTGGTCAGAGGAACCGTGCGGTGGGTGCTACCGCTCTAAATGAGCGAAGCAGTCGTTCTCATAGTGTGCTGACGATTCATGTCAGAGGAAGGGACTTAGTTTCTAATTCAGTTCTTAAGGGTTGTCTCCATCTTGTGGATTTAGCTGGGAGTGAGAGAGTTGAGAAATCCGAAGCTGTTGGCGAGAGACTAAAGGAGGCACAACATATTAATAAGTCTCTTTCTGCACTGGGCGATGTTATCTCTGCTTTGGCGCAGAAGAGTCAACATATTCCTTATAGAAATAGCAAACTCACACAAGTTTTACAAGATTCATTAGGTGGCCATGCAAAGACTTTGATGTTTGTTCATATAAATCCTGAAATCAACGCCATTGGGGAGACAATTAGCACATTGAAGTTTGCGGAGAGGGTTGCATCTATTGAACTTGGAGCTGCTAAATCCAACAAAGAAACCGGTGAAATACGAGAGCTCAAGGAAGAGATATCGAATATCAAATTGGCATTGGAGAGGAAGGACACTGAACTGGAGCAATGGAAATCTGGAAATGCACGGAATGCCGCAGAATCTCAGAAACCAAGAGCCGCTTCACCTTTCCGTTTGCCCAAATATGCTAACAGTGGCGGCATGAAGCCAGAAAATAGTCAAAGATCCATTGATGATAGAAGCTCCGAGGCAAAAAGTTACTCTTCCGGTAAGCAACGACGGTCGAGATTTCCCTCAAAATTTATCGACAAGGACTCCATACCAAAAATGTCTCTTCTGGCTGAAGAAAAGTCAGTGAGCTCAGGAAAGCATAGATCACCATCACCTCCAATCAGGAGATCAATATCCACTGATAGAGGTTCTGTCACTAAAAGTAAGATCAAAGTTGACAATGCAGAAAACCAACCAATTTTGAAGCATCCATTTCCAGCTAGAGTACCAGTAAATAAATCTCTTGCAACAATGACACCATCTATAGACAATAACTCAAGGGTCTATGTACATTCACAAGAGCCGGTGAAGCACGATAACATTTCCGAACCTCTCATTAACTTCGAGAAAGTAAGCTTTAGGAAAGTTCATCAAGAAAACGAAGAGGAACAGTCCAAACAACCATTTGGAGTAGTAAGACAAGGAAGTGTTAGGAAAAACAAAGCTGACAATAACGTCAAGGCCAAGCGTCTTCAACAATCTCCCTTTAGGATTCAAAAGACCGATTTAATACCTAAATCTATTCCTAACATAGAAATTGCTGGCGAAATTGTGGAGGCACCTCGAAAGATTGATTACTCCGAGTCAGAAAATGATTTTAACTTTATGCAGTCTGCAATCAATGGTGCATTAAATGTTCCAAAAAAACGTCGCAGCATCTCAAGGAATTCTCAAAACCTTGAACCAAGAGGAATTGTGCAAGGAGCTGAACCATTGTTATCTAGTAAAGTTGAAAACAAACTTTCAAACGGTCAAGGTCGCAATCTTAAGGAAGTCAATACGTCCATGCACGACTTTAAACGAAGCCGATCAACACCACGAGGAAAGTTTTTCGTTTTATGA 3402 0.4042 MPQESSLLSSIFASPASKRILNLKGSFFNNSEVNEEINDHELAYRKAEEAASRRNEAAEWLREMDEVAYSSLSKQPSEEQFCLALRNGLILCNVLNKINPGAILKVVDNQVLAVHSPEGPAHSAIQYFENMKNFLDAVRDMTLLTFEASDLEKGGSSSKVVDCILCLKGYYEWKLSGGVGVWRYGGTVRITSFPKETPSSSILGSESIDESLDESQSSQYEQLLEFLRMSQEVSIEETRTASALAFLFDHFGLKLLRAFVREIDDGIEDLPLNAMVIDTFLSKIVRDFSTLLVSQGTQLAFFLKKILKGDNGCLSKKEFMEAIALYLNQRSSLSSNDISKFCICGGKRDSNAQNNVKFSSKYAEIIDAQQKQLEGMRYLLEEIKKEVKQIQFQWDQESSRLENHIKSLEATSSSYHKVLEENRSLYNQVIDLKGSIRVYCRVRPFLGQSNGQSTVDYIGENGNIMILNPLKQGKDARKVFSFNKVFATNATQEQIYSDTKPLVRSVLDGYNACIFAYGQTGSGKTYTMSGPDLMTEETWGVNYRALRDLFHISKERADAINYEVAVQMIEIYNEQVRDLLVSDGSNRRLDIRNNSQLNGLNVPDACLVQVSCTQDVLDLMKIGQRNRAVGATALNERSSRSHSVLTIHVRGRDLVSNSVLKGCLHLVDLAGSERVEKSEAVGERLKEAQHINKSLSALGDVISALAQKSQHIPYRNSKLTQVLQDSLGGHAKTLMFVHINPEINAIGETISTLKFAERVASIELGAAKSNKETGEIRELKEEISNIKLALERKDTELEQWKSGNARNAAESQKPRAASPFRLPKYANSGGMKPENSQRSIDDRSSEAKSYSSGKQRRSRFPSKFIDKDSIPKMSLLAEEKSVSSGKHRSPSPPIRRSISTDRGSVTKSKIKVDNAENQPILKHPFPARVPVNKSLATMTPSIDNNSRVYVHSQEPVKHDNISEPLINFEKVSFRKVHQENEEEQSKQPFGVVRQGSVRKNKADNNVKAKRLQQSPFRIQKTDLIPKSIPNIEIAGEIVEAPRKIDYSESENDFNFMQSAINGALNVPKKRRSISRNSQNLEPRGIVQGAEPLLSSKVENKLSNGQGRNLKEVNTSMHDFKRSRSTPRGKFFVL 1133
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g04097 1133 MobiDBLite consensus disorder prediction 977 998 - -
Tsu05g04097 1133 Pfam Calponin homology (CH) domain 52 172 IPR001715 GO:0005515
Tsu05g04097 1133 Gene3D Kinesin motor domain 377 764 IPR036961 -
Tsu05g04097 1133 PANTHER KINESIN-LIKE PROTEIN KLP-3 29 1129 - -
Tsu05g04097 1133 SMART kinesin_4 433 770 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tsu05g04097 1133 Coils Coil 366 386 - -
Tsu05g04097 1133 ProSiteProfiles Calponin homology (CH) domain profile. 51 172 IPR001715 GO:0005515
Tsu05g04097 1133 MobiDBLite consensus disorder prediction 836 865 - -
Tsu05g04097 1133 MobiDBLite consensus disorder prediction 886 909 - -
Tsu05g04097 1133 SUPERFAMILY Calponin-homology domain, CH-domain 45 200 IPR036872 -
Tsu05g04097 1133 Pfam Kinesin motor domain 441 762 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tsu05g04097 1133 PANTHER HEAVY CHAIN, PUTATIVE-RELATED 29 1129 - -
Tsu05g04097 1133 MobiDBLite consensus disorder prediction 799 865 - -
Tsu05g04097 1133 ProSiteProfiles Kinesin motor domain profile. 435 762 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tsu05g04097 1133 MobiDBLite consensus disorder prediction 878 909 - -
Tsu05g04097 1133 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 435 799 IPR027417 -
Tsu05g04097 1133 Coils Coil 30 50 - -
Tsu05g04097 1133 PRINTS Kinesin heavy chain signature 509 530 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tsu05g04097 1133 PRINTS Kinesin heavy chain signature 632 649 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tsu05g04097 1133 PRINTS Kinesin heavy chain signature 712 733 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tsu05g04097 1133 PRINTS Kinesin heavy chain signature 663 681 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tsu05g04097 1133 SMART ch_5 53 170 IPR001715 GO:0005515
Tsu05g04097 1133 Coils Coil 769 796 - -
Tsu05g04097 1133 Gene3D - 36 181 IPR036872 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g04097 Tsu-Chr5 51698021 51704978 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu05g04097 380 779 Calmodulin-binding Proteins AT5G65930 39.454 1.21e-76 275
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g04097 K10406 - gmx:100786466 1674.06
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu05g04097 05 51698021 51704978 Tsu05g04097 05 51698021 51704978 ECH
Tsu03g01015 03 9404292 9412878 Tsu05g04097 05 51698021 51704978 PCT