Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g04005 ATGGAGAATAATTTCCCCATCCTTTTGAGTCTTATTTTCTTAGTGTTTTTTATCCTACATGTGAGAAAGAGATTCAAAAGTGACAAAATTACCTCAAACCTTCCACCAGGGCCTTGGAAACTACCTATTTTTGGAAGCATATATCACTTGATTGGATCCCTACCACATCACAAAATGAGAGAATTGTCCCAAAAATATGGTCCTCTCATGCACCTACAACTTGGAGAAACATCAGCCATGGTGGTTTCTTCTAAAGAACTTGCAAAAGAGGTGTTGAAAACAAATGAAGCCAGTTTTGCTCAAAGACCTCGCTCTCTTGGTATAGAAATTATTTCTTATGGTTGCACTGACATTGTATTTTCACCCTATGGAGACTATTGGAGGCAGCTAAGAAAAATTTGCACATTGGAGCTGTTGACTGCTAAACGTGTGAGATCATTCCGATCGATTCGAGAGGAAGAGGTGTCAAAATTAATTCAACATATTTCTATAAACACAGGAACTACTATCAATCTCACTGATGAAATCTTATCTATGACATATAACATAGTTTCAAGGGCATCTTTTGGTGATAAATGCAAGGACCAAGAAGCATATATCTTGTTCATGAAGGAATGTATGAGGTTGGCTGAGAATTTCAATGTCAATAATTTGTTTCCCTCCCAACATTGGCTACATGTGATTAGTGGAATGGTGCATAAATTAAAGAGATTGCATAGAAGTGGTGATATGGTTCTTGAAAATATCATCAACAAAGCAACAGAAAAGACTTGTGGAGATGGAAGTCTTCTATCCTATCTTTTGAAGCTCAAAGATGACGGCTCTACTAATCCGACTGGATTTCATTTGACAATCAACAACATTAAAGCCATTattcagGATATGCTTATCGGTGGAAGTGATTCATCATCTTTAACTATGGAATGGGCTTTCTCAGAAATGCTGAAAAATCCTAAAGCACTAAAAAGGGCTCAAGAAGAAGTTAGACAAGCTTTTGGTAGTAGAGGATATATCGATGAAATGGATCTTCAAGAACTGAAATTTCTAAAAGCAGTTATTAAAGAAACCTTAAGATTGCACCCTATTAATCCTGTATATTCAAGAGAGTGTATCAAATCGTGTGAGATTAATGGATACAGAATACCATCTGGAACACAAGTGTTTGTGAATGCGTGGGCAATTGGAAGAGACCAAAAGTACTGGAATGAAGGAGAAAAGTTTTATCCGGAGAGGTTCTTGGATTGTCCAATTGATTACAAAGGGTCTGATTTTGAGTTCTTGCCTTTTGGTGCTGGAAGAAGAATGTGTCCTGGAATATCTTTCGCTATACCTAATATAGAACTTGCTCTTGCACAATTGCTGTACTATTTTGATTGGAAGTTTCCCTTTGGAACCAGTCATGAAAATTTTGACATGACCGAAGCCTCTGGCGCTGTAGTGAAAAGGAAAAGTCAGCTAATTGTAATTCCAACTCCTTACAATCCTTGA 1488 0.3703 MENNFPILLSLIFLVFFILHVRKRFKSDKITSNLPPGPWKLPIFGSIYHLIGSLPHHKMRELSQKYGPLMHLQLGETSAMVVSSKELAKEVLKTNEASFAQRPRSLGIEIISYGCTDIVFSPYGDYWRQLRKICTLELLTAKRVRSFRSIREEEVSKLIQHISINTGTTINLTDEILSMTYNIVSRASFGDKCKDQEAYILFMKECMRLAENFNVNNLFPSQHWLHVISGMVHKLKRLHRSGDMVLENIINKATEKTCGDGSLLSYLLKLKDDGSTNPTGFHLTINNIKAIIQDMLIGGSDSSSLTMEWAFSEMLKNPKALKRAQEEVRQAFGSRGYIDEMDLQELKFLKAVIKETLRLHPINPVYSRECIKSCEINGYRIPSGTQVFVNAWAIGRDQKYWNEGEKFYPERFLDCPIDYKGSDFEFLPFGAGRRMCPGISFAIPNIELALAQLLYYFDWKFPFGTSHENFDMTEASGAVVKRKSQLIVIPTPYNP 495
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g04005 495 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 429 438 IPR017972 GO:0005506|GO:0016705
Tsu05g04005 495 PRINTS E-class P450 group I signature 179 197 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu05g04005 495 PRINTS E-class P450 group I signature 287 304 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu05g04005 495 PRINTS E-class P450 group I signature 390 414 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu05g04005 495 PRINTS E-class P450 group I signature 426 436 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu05g04005 495 PRINTS E-class P450 group I signature 307 333 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu05g04005 495 PRINTS E-class P450 group I signature 63 82 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu05g04005 495 PRINTS E-class P450 group I signature 436 459 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu05g04005 495 PRINTS E-class P450 group I signature 350 368 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu05g04005 495 PRINTS E-class P450 group I signature 87 108 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu05g04005 495 PRINTS P450 superfamily signature 427 436 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu05g04005 495 PRINTS P450 superfamily signature 298 315 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu05g04005 495 PRINTS P450 superfamily signature 351 362 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu05g04005 495 PRINTS P450 superfamily signature 436 447 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu05g04005 495 PANTHER CYTOCHROME P450 71B11-RELATED 11 493 - -
Tsu05g04005 495 Gene3D Cytochrome P450 27 490 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu05g04005 495 SUPERFAMILY Cytochrome P450 35 492 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu05g04005 495 PANTHER CYTOCHROME P450 FAMILY PROTEIN 11 493 - -
Tsu05g04005 495 Pfam Cytochrome P450 35 483 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g04005 Tsu-Chr5 51002232 51003982 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu05g04005 32 482 Cytochrome P450 AT3G48310 39.956 4.95e-123 367
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g04005 - K23807 gmx:100779851 552.362