Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g04002 ATGAATTTACCACCAGGTCCATGGACACTACCCCTCATAGGAAACATACATCATGTTATCAGTAGCTCATTGCCTCATCACTGCTTCAAAAATTTGGCAGAGAAATTTGGACCATTAATGCACCTAAAGCTAGGAGAAGTATCATACATAATAGTTAGTTCACCAGAAATGGCCAAAGAGATTATGAAAACAAATGACCTTACCTTTTGTGATAGGCCAAATCTTCTTTTATCCACAATACTTACTTACAATGCTACTGATATTGCTTTCTCTACCTATGGAGAATACTGGAGGCAACTACGAAAGATATGCGTAATAGAGCTATTAAGTGCAAAGTGTGTCCAATCATTTAGGTCCATAAGAGAAGAAGAGGTGTCAAATCTTGTTAAATCAATATCTGCAAGTGAAGGATCAGTTGTTAATCTCACTCAGAAGATTTTGGCAACGACATATGGGATAATAGCGCAGACAGCTTTTGGGAAAAGGAACATACGCCAAGAAGCGTTCAAGTTAGCAATCGACCAAGCATTGACTCTGTTGGGAGGAGTTTGTATTGTTGATTTGTATCCTTCTATTAAAATGCTTCAAAGGCATCCCTTGACCGATGATAATTTGAAAGCAGTCATTCAGGACTTGTTCACTGGTGGTGGCGAAACATCGTTAGGGGCTGTGTTGTGGGCTATGTCCGAGATGATAAAGAACCCAAAGGTGATGGAAGAAGCACAAGCTGAGGTAAGAAGAGTGTTTGATGGAAGGGGTTTGTGGACGAGACAAAGTTGCACCAATTGA 789 0.4005 MNLPPGPWTLPLIGNIHHVISSSLPHHCFKNLAEKFGPLMHLKLGEVSYIIVSSPEMAKEIMKTNDLTFCDRPNLLLSTILTYNATDIAFSTYGEYWRQLRKICVIELLSAKCVQSFRSIREEEVSNLVKSISASEGSVVNLTQKILATTYGIIAQTAFGKRNIRQEAFKLAIDQALTLLGGVCIVDLYPSIKMLQRHPLTDDNLKAVIQDLFTGGGETSLGAVLWAMSEMIKNPKVMEEAQAEVRRVFDGRGLWTRQSCTN 262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g04002 262 Pfam Cytochrome P450 198 252 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu05g04002 262 Pfam Cytochrome P450 4 195 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu05g04002 262 SUPERFAMILY Cytochrome P450 2 259 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu05g04002 262 Gene3D Cytochrome P450 196 262 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu05g04002 262 PANTHER CYTOCHROME P450 71B11-RELATED 197 253 - -
Tsu05g04002 262 PANTHER CYTOCHROME P450 71B11-RELATED 2 196 - -
Tsu05g04002 262 Gene3D Cytochrome P450 1 195 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu05g04002 262 PRINTS E-class P450 group I signature 57 78 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu05g04002 262 PRINTS E-class P450 group I signature 149 167 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu05g04002 262 PRINTS E-class P450 group I signature 33 52 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu05g04002 262 PANTHER CYTOCHROME P450 71D10 197 253 - -
Tsu05g04002 262 PANTHER CYTOCHROME P450 71D10 2 196 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g04002 Tsu-Chr5 50954813 50956603 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu05g04002 2 246 Cytochrome P450 AT3G26280 35.065 4.69e-54 181
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g04002 - K23806 gmx:102670080 296.204