Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g04001 ATGAGGTTACATCCTATCCTACCGTTGTTACTTCCAAGAGAAAGTAGGGAGAGATGCCAAATCAATGGATATGAGATTCCAGCAAAGACTAGAATTGTTGTGAATGCTTGGGCAATTGGAAGAGATCCGAGGTATTGGATTGAAGCGGATAGTTTTAAGCCTGAGAGGTTTGTTAATAGCTTAATTGATTTCAAAGGTACAGACTTTGAATACATACCATTTGGTGCTGGAAGGAGGATGTGTCCTGGCATTGCATATGCCATACCCAACGTTGAGTTGCATCTTGCTCAGTTACTTTACCACTTTGATTGGAAGCTTCCCAATGGAATGAAGAATGAAGAACTTGATATGACCGAGTCATTTGGGATTACTGCAGGAAGAAAACATGATCTATGTTTGATTCCTATAACTCGTCGTACTATATAA 426 0.3967 MRLHPILPLLLPRESRERCQINGYEIPAKTRIVVNAWAIGRDPRYWIEADSFKPERFVNSLIDFKGTDFEYIPFGAGRRMCPGIAYAIPNVELHLAQLLYHFDWKLPNGMKNEELDMTESFGITAGRKHDLCLIPITRRTI 141
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g04001 141 PANTHER CYTOCHROME P450 71D10 1 138 - -
Tsu05g04001 141 Pfam Cytochrome P450 1 123 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu05g04001 141 PRINTS E-class P450 group I signature 35 59 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu05g04001 141 PRINTS E-class P450 group I signature 71 81 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu05g04001 141 PRINTS E-class P450 group I signature 81 104 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu05g04001 141 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 74 83 IPR017972 GO:0005506|GO:0016705
Tsu05g04001 141 Gene3D Cytochrome P450 1 130 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu05g04001 141 SUPERFAMILY Cytochrome P450 1 138 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu05g04001 141 PANTHER CYTOCHROME P450 71B11-RELATED 1 138 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g04001 Tsu-Chr5 50954358 50954783 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu05g04001 2 135 Cytochrome P450 AT3G26330 58.955 6.97e-52 169
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g04001 - K23806 lja:Lj5g3v2240830.1 232.646