Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g03995 ATGGACATATCATTCTTACCcttccttttattttcaacaagtttaatatttcttttcatCACACAAATTCTAAAATTGGGAAAAAGAATACTAAGAGTCacaagcaaaactcaaaaaaccaTTCCACCTGGACCATGGAACCTTCCAATCATAGGTAGCATACACCACCTTATTGGTTCTCTACCTCATCATAGTTTAAGAAATTTATCCAAAATACATGGCCCTATCATGCACCTAAAACTAGGTGAAATATCAACCGTAATAATTTCTTCACCTGAATTTGCAAaagagattttaaaaacttatgaTACCATTTTTGCTCATAGACCACACCAAGTTGGTGCAGACATCATGTGTTACGGTTCCACCGACGTTGCAACGGCGCCTTACGGTAACTATTGGAAACAATTAAGAAGAATTTGTTCACAAGAGCTTCTTTGTACAAAACGTGTTAGATCATTTCAATCAATTAGAGAACAAGAGGtatcaaatttaataaaatgtatTTCTAATAACATTGGATCATGTATTAACCTTAGTGAAAATGTTGCTTGCATGACAAGTTCCATTACTTCAAGAGCAGCTTTTGGTAAAATATGTAAAGATCAACAAgagtttattttgttgattaagAAACTTGTGAAAATTGCTGAAGGGTTTGTTATAATGGATTTGTTTCCTTCACAAAAGTGGTTACATGTGATAAGTGGAATGAGGCCTAAATTGGAGGAGTTGCATATGAAATTTGAtaatattattgaaaatattattaaggAGGCTATGACAAAGAAGGGTGATGGAGAGACAATAGAGGGTTTTCTTTCTGTTCTTCTAAGGATTAAAGATTGTGATGATGGCCTTGAGTGTCCTTTGACTATTGACAATATCAAAGCTGTAATTTTGGACATGTTTGTTGCTGGAAGTGATACATCATCTGCAATTATAGAATGGGCCATTTCAGAAATGATGAAAAATCCAACAGTAATGATCAAAGCTCAACAAGAAATAAGAGAACATTTTGGCAGCAAAGGATACATTGATGAAACATCTCTTCAAGAACTGAAATATCTAAAAGCAGTCATCAAAGAAACGTTGAGATTACACCCTCCTTTCCCTCTTCTTCTCCCTAGAGAATGCAGAGAAACTTGCGAGATTAAAGGGTATACAATACATGCCGGAAACAAAGTGATAGTAAATGCATGGGCAATTGGAAGAGACCCTGAGTATTGGAGTGAACCAGACAAGTTTTTTCCTGAGAGATTTTTGGATTGTTCGATTGATTACAAAGGTTCCAATATCGAATACATACCATTCGGTGCTGGAAGGCGAATTTGTCCTGGAATTTCATTTGGTGTATCTAGTATTGAACTCTCTCTTTCACAACTTCTCTACCATTATAATTGGGAACTTCCTAGTGGATTAACTATGGAAAATCTAGAAATGACCGAAGCTTTGAGTTCCTCGTCAAGAAGGAAAACGGATCTTATTCTAGTTCCTACTTCTTGTTATAATCATGTACATGCTTCGTAA 1530 0.3314 MDISFLPFLLFSTSLIFLFITQILKLGKRILRVTSKTQKTIPPGPWNLPIIGSIHHLIGSLPHHSLRNLSKIHGPIMHLKLGEISTVIISSPEFAKEILKTYDTIFAHRPHQVGADIMCYGSTDVATAPYGNYWKQLRRICSQELLCTKRVRSFQSIREQEVSNLIKCISNNIGSCINLSENVACMTSSITSRAAFGKICKDQQEFILLIKKLVKIAEGFVIMDLFPSQKWLHVISGMRPKLEELHMKFDNIIENIIKEAMTKKGDGETIEGFLSVLLRIKDCDDGLECPLTIDNIKAVILDMFVAGSDTSSAIIEWAISEMMKNPTVMIKAQQEIREHFGSKGYIDETSLQELKYLKAVIKETLRLHPPFPLLLPRECRETCEIKGYTIHAGNKVIVNAWAIGRDPEYWSEPDKFFPERFLDCSIDYKGSNIEYIPFGAGRRICPGISFGVSSIELSLSQLLYHYNWELPSGLTMENLEMTEALSSSSRRKTDLILVPTSCYNHVHAS 509
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g03995 509 Gene3D Cytochrome P450 34 500 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu05g03995 509 PRINTS P450 superfamily signature 306 323 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu05g03995 509 PRINTS P450 superfamily signature 359 370 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu05g03995 509 PRINTS P450 superfamily signature 436 445 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu05g03995 509 PANTHER CYTOCHROME P450 71B11-RELATED 10 506 - -
Tsu05g03995 509 SUPERFAMILY Cytochrome P450 42 492 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu05g03995 509 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 438 447 IPR017972 GO:0005506|GO:0016705
Tsu05g03995 509 PRINTS E-class P450 group I signature 445 468 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu05g03995 509 PRINTS E-class P450 group I signature 435 445 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu05g03995 509 PRINTS E-class P450 group I signature 94 115 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu05g03995 509 PRINTS E-class P450 group I signature 399 423 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu05g03995 509 PRINTS E-class P450 group I signature 358 376 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu05g03995 509 PRINTS E-class P450 group I signature 295 312 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu05g03995 509 PRINTS E-class P450 group I signature 315 341 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu05g03995 509 PRINTS E-class P450 group I signature 70 89 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu05g03995 509 PANTHER CYTOCHROME P450 FAMILY 71 PROTEIN 10 506 - -
Tsu05g03995 509 Pfam Cytochrome P450 42 484 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g03995 Tsu-Chr5 50901594 50903564 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu05g03995 42 504 Cytochrome P450 AT3G26330 40.552 3.26e-125 373
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g03995 - K23807 gmx:100779851 688.337