Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g03992 ATGCCCCATCATCACTGCTTAAAAGTTTTAGCAGAGAAATATGGACCCTTAATGTACCTAAAACTAGGTGAAGTACCTTACATAGTAGTTACTTCACCAGAGATAGCCAAAGAGGTTATGAAAACACAAGACTTAAACTTCTGTGATAGGCCAAACCTTCTTTTGCCTACAATATTTTCTTACAATGCTACAGATATTGCATTTTCTCCGTACGGAGATTATTGGAGGCAACTACGAAAAATATGTATTGTAGAGCTCTTAAGTTTAAAACGTGTCCAATCATTTCGGTCCATACGAGAAGAAGAGGTTTCAAAACTAGTTAAATCAATATCTACATGTGAAGGATCAATTGTTAATCTCACTGATAACATATTCTCAATGACATATGGGATAACTGCAAGAGCAGTTTTCGGGAAAAGGACCAAACACCAACAAGTGTTTAAAACTGCGATGGAGGAAATAGTAATCTTGTTTGGAGGATTTTGTATTGCTGATTTGTATCCTTCTATTAGAATGTTGCTTCAGAGGGTGAGTAGAGCAAAAACTAGACTTGAAAAACTTTGTAGAGAAACTGATAGGATATTGCAAGACATCATCAATGATCACAGAAGCAGTCACGAAGATGAAGATCTAGTTGATGTTCTTCTCAAGTTTCAGCATGGTAATAATGATCCCTTGCAAAATCACTTGACTGATGACAATATTAAAGCAGTTATCCAGGACTTGTTCACTGCTGGTAGCGAAACATCCTCAGGGACTGTGGTATGGGCGATGTCTGAGATGGTAAAGAATCCAAAGGTAATGGAAGAAGCACAATCCGAGGTAAGAAGGGTGTTTGGTAGGAAGAGGTATGTAGATGAGACAGAGTTGCACCAATTGATATACCTAAAGGCTATCATCAAAGAAACACTGAGACTACACCCTCTTATACCATTGTTGGTTCCAAGAGAAAGTAGGGAGAGATGTGAAATCAATGGGCATGAGATCCCAGCTAAGACAAGGGTTGCTGTCAACATTTGGGCCATTGCAAGAGATCCAAATCATTGGGATGAAGCCGAGAGTTTTAAACCTGAAAGGTTTGTTAATAGCACATTTGATTTTAAAGGTACAAACTTTGAATATATTCCATTTGGTGCCGGAAGGAGGATGTGTCCGGGTATAGCATTTGCTTTACCCAATGTTGAACTGCCACTTGCTACGTTACTTTACCACTTTGATTGGAAGCTTCACAATGGAATGAAGAACGAAGAAGTTGACATGAGTGAGTCATTTGGATTTACTCTAAGAAAGAAAAGCGATCTTTGTTTGATTCCTATTACTCGACGTCCTTAA 1332 0.3844 MPHHHCLKVLAEKYGPLMYLKLGEVPYIVVTSPEIAKEVMKTQDLNFCDRPNLLLPTIFSYNATDIAFSPYGDYWRQLRKICIVELLSLKRVQSFRSIREEEVSKLVKSISTCEGSIVNLTDNIFSMTYGITARAVFGKRTKHQQVFKTAMEEIVILFGGFCIADLYPSIRMLLQRVSRAKTRLEKLCRETDRILQDIINDHRSSHEDEDLVDVLLKFQHGNNDPLQNHLTDDNIKAVIQDLFTAGSETSSGTVVWAMSEMVKNPKVMEEAQSEVRRVFGRKRYVDETELHQLIYLKAIIKETLRLHPLIPLLVPRESRERCEINGHEIPAKTRVAVNIWAIARDPNHWDEAESFKPERFVNSTFDFKGTNFEYIPFGAGRRMCPGIAFALPNVELPLATLLYHFDWKLHNGMKNEEVDMSESFGFTLRKKSDLCLIPITRRP 443
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g03992 443 Gene3D Cytochrome P450 1 442 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu05g03992 443 PANTHER CYTOCHROME P450 71B11-RELATED 3 441 - -
Tsu05g03992 443 SUPERFAMILY Cytochrome P450 3 441 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu05g03992 443 Coils Coil 170 190 - -
Tsu05g03992 443 Pfam Cytochrome P450 4 431 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu05g03992 443 PANTHER CYTOCHROME P450 71D10 3 441 - -
Tsu05g03992 443 PRINTS P450 superfamily signature 245 262 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu05g03992 443 PRINTS P450 superfamily signature 298 309 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu05g03992 443 PRINTS P450 superfamily signature 375 384 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu05g03992 443 PRINTS P450 superfamily signature 384 395 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu05g03992 443 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 377 386 IPR017972 GO:0005506|GO:0016705
Tsu05g03992 443 PRINTS E-class P450 group I signature 11 30 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu05g03992 443 PRINTS E-class P450 group I signature 35 56 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu05g03992 443 PRINTS E-class P450 group I signature 127 145 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu05g03992 443 PRINTS E-class P450 group I signature 234 251 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu05g03992 443 PRINTS E-class P450 group I signature 254 280 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu05g03992 443 PRINTS E-class P450 group I signature 297 315 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu05g03992 443 PRINTS E-class P450 group I signature 338 362 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu05g03992 443 PRINTS E-class P450 group I signature 374 384 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu05g03992 443 PRINTS E-class P450 group I signature 384 407 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g03992 Tsu-Chr5 50868646 50870529 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu05g03992 4 438 Cytochrome P450 AT3G26330 43.341 6.67e-132 388
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g03992 - K23806 gmx:606548 591.267