Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g03985 ATGAAAACACATGACCTTAGCTTTTGTGATAGGCCAAACCTTCTTTTGTCAACAATATGGAGTTACAATGCTTCAGATATTATATTCTCTCCATATGGAGAACATTGGAGGCAAATACGAAAGATATGTGTTATAGAGCTATTAAGCGTAAAGAGTGTTCAATCATTTAGGCCCATAAGAGAAGAAGAAGTGTCGAATCTTGTTAAATCAATAGCTTCAACTGAAGGATCAGTTGTTAATCTCACTCAGAAGATTTCCTTAATGACATATGGGGTAACAATGCGTGCGGCTTTTGGTAAAAAGATCAAACACCAACAAGCGTTCAAATTAGCAATACAAGAAACAGCAAGTTTGTTGGGAGGATTTTGTATAGCTGATTTGTACCCTTCTGTTAAAATACTTCAAAGGGTGAATAGGTCGAAGACCAAAATTGAAAAGGTTCATAGAGAGATCGATATGATATTGCAAGACATCATCGATGATCACAAAAGTATTCACAAGGAAGATAATAAGGATGAAGATCTAGTTGATGTTCTTCTCAAGATTCAACAGGAAAATGATCATTCACAACATCCCTTAACTGATGATAATTTGAAACCAATCATTCAGGACATGTTCGGTGCTGGTACTGAAACATCGTCAGGGGTTGTGTTATGGGGGATGTCTGAGATGGTAAAGAATCCAAAAATAATGGAAGAAGCACAAGCTGAAGTAAGAAGAGTGTTTGATAAAAAGGGTTATGTGGATGAGACAGAGATGCACCAATTGATATACTTAAAGTCTGTCATCAAAGAAACATTAAGGTTGCATCCTATTGCACCATTGTTAGTTCCAAGAGAAAGTAGGGAGAGATGCCAAATCAATGGGTATGAGATCCCAGCTAAGACGAGGGTCCTTATCAATGCTTACGCCATTGGAAGGGATCCAAAATATTGGGTTGAACCTGAGAGTTTTAAACCTGAGAGGTTTGTCGATAGCCTAATTGATTTCAAAGGCACTGATTTTGAATTCATACCATTTGGTGCCGGAAGGAGAATGTGTCCAGGTATAGCATTTGCCTTACCCAATGTTGAGTTGCCACTTGCTATGTTACTTTACCACTTTGATTGGAAACTTCCCAACGAAATAAAGAACGAAGAACTAGATATGACCGAGTCATTTGGGATGACAGTAGGAAGAAAACACGACTTATACTTGATTCCTATTACTCATCATTTTTGA 1221 0.3759 MKTHDLSFCDRPNLLLSTIWSYNASDIIFSPYGEHWRQIRKICVIELLSVKSVQSFRPIREEEVSNLVKSIASTEGSVVNLTQKISLMTYGVTMRAAFGKKIKHQQAFKLAIQETASLLGGFCIADLYPSVKILQRVNRSKTKIEKVHREIDMILQDIIDDHKSIHKEDNKDEDLVDVLLKIQQENDHSQHPLTDDNLKPIIQDMFGAGTETSSGVVLWGMSEMVKNPKIMEEAQAEVRRVFDKKGYVDETEMHQLIYLKSVIKETLRLHPIAPLLVPRESRERCQINGYEIPAKTRVLINAYAIGRDPKYWVEPESFKPERFVDSLIDFKGTDFEFIPFGAGRRMCPGIAFALPNVELPLAMLLYHFDWKLPNEIKNEELDMTESFGMTVGRKHDLYLIPITHHF 406
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g03985 406 PRINTS E-class P450 group I signature 88 106 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu05g03985 406 PRINTS E-class P450 group I signature 301 325 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu05g03985 406 PRINTS E-class P450 group I signature 260 278 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu05g03985 406 PRINTS E-class P450 group I signature 347 370 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu05g03985 406 PRINTS E-class P450 group I signature 217 243 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu05g03985 406 PRINTS E-class P450 group I signature 337 347 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu05g03985 406 PRINTS E-class P450 group I signature 197 214 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu05g03985 406 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 340 349 IPR017972 GO:0005506|GO:0016705
Tsu05g03985 406 Gene3D Cytochrome P450 1 399 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu05g03985 406 PANTHER CYTOCHROME P450 71B11-RELATED 1 404 - -
Tsu05g03985 406 SUPERFAMILY Cytochrome P450 2 401 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu05g03985 406 Pfam Cytochrome P450 18 389 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu05g03985 406 PRINTS P450 superfamily signature 208 225 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu05g03985 406 PRINTS P450 superfamily signature 261 272 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu05g03985 406 PRINTS P450 superfamily signature 338 347 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu05g03985 406 PRINTS P450 superfamily signature 347 358 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu05g03985 406 PANTHER CYTOCHROME P450 71D10 1 404 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g03985 Tsu-Chr5 50791394 50792716 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu05g03985 1 401 Cytochrome P450 AT3G26210 41.606 2.77e-115 344
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g03985 - K23806 gmx:606548 548.895