Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g03980 ATGGATCAACCTATCATCATAGAGTTTAAGAACACCTTTTCGAAAACCACCTTCATGGTTTTCTTTATCTTCCTCTTGGTCCTAGTACTCAAAATAGTTAAACAAAGTTCCAATGTCAATTTACCACCAGGACCATGGACATTTCCCTTCATAGGAAACATGCATCAGATTATTATGAGCAGTTCATTGCCCCATCACTGCTTCAAAAAATTGGCAGAGAAATATGGACCCTTAATGCACCTAAAATTAGGAGAAGTATCATACCTAATAGTTACTTCACCAACAATGGCAAAAGAGATTATGAAAACACATGACCTCACCTTTTGTGATAGGCCGGACCTTCTTTTAACCTCAATATTTACTTATAATGCTACAGATATTGTCTTCTCTAAATATGGAGAATATTGGAGGCAACTACGAAAGTTATGTGTTATAGAGCTATTAAGCATAAAGCGTGTCCAATCATTCAGGTATATAAGAGAAGAAGAAGTGTCGAATCTTGTTAAATCAATATCTGCAAGTGAAGGATCAGTTGTTAATCTCACTCAGAAGATTTTGGCAACGACATATGGCATAATAGCGCGGACAGCTTTTGGGAAAAGGAATATACATCAAGAAGCGTTCATATTAGCAATGGAGGAAGTAACAAGCCTGTTGGGAGGAGTTTGTATTGTTGATTTGTATCCATCTATTAAAATGCTCCGAATGGTGAGTAGGGCGAAGATCAAACTTGAAAAAGCTACAAGAGATCTTGATATAATATTGCAAGACATCATCGATGATCATAAAAGTAGTTGTAGAGAAGAACGCAAGGATGAAGATCTAGTTAATGTTCTTCTCAATATTCAACAAGAAAATTATCACTCACAGCATCCCTTGACCGATGATAATTTGAAGGCAGTCATCCAGGACATGTTCGCTGGTGGTGGCGAAACATCATCAGGGACTGTATTATGGGGAATGTCTGAGATGGTCAAAAACCCAAAAGTGATGGAAGAAGCACAAGCTGAGGTAAGAAGAGTGTTTGATGGGAAGGGTTTTGTGGATGAGACAGAGTTGCACCAATTGATATACTTAAAGTCTGTCATCAAAGAAACATTGAGGTTGCATCCTACTGCACCATTGTTAATTCCAAGAGAAAGTAGAGAGAGAAGTCAAATCAATGGGTATGAGATCCCAGCTAAGACGAGGGTCCTTATTAATGCTTATGCCATTGGAAGAGATCCAAAATATTGGGTTGAAGCTGAGAGTTTTAAACCTGAGAGATTTGTTAATAGCCCTATTGATTTCAAAGGCACTGACTTTGAATTCATACCATTTGGTGCCGGAAGAAGAATGTGTCCAGGTATAACATTTGCCTTACCCAACGTTGAGCTGCCTCTTGCTCAGTTACTTTACCACTTTGATTGGAAGCTACCCAATGGAATGAAGAATGAAGAACTTGATATGACCGAGTCATTTGGAATTACCGTAGGAAGAAAACATGATCTATACTTGATTCCTATTACTCGTCGTACTTAG 1521 0.382 MDQPIIIEFKNTFSKTTFMVFFIFLLVLVLKIVKQSSNVNLPPGPWTFPFIGNMHQIIMSSSLPHHCFKKLAEKYGPLMHLKLGEVSYLIVTSPTMAKEIMKTHDLTFCDRPDLLLTSIFTYNATDIVFSKYGEYWRQLRKLCVIELLSIKRVQSFRYIREEEVSNLVKSISASEGSVVNLTQKILATTYGIIARTAFGKRNIHQEAFILAMEEVTSLLGGVCIVDLYPSIKMLRMVSRAKIKLEKATRDLDIILQDIIDDHKSSCREERKDEDLVNVLLNIQQENYHSQHPLTDDNLKAVIQDMFAGGGETSSGTVLWGMSEMVKNPKVMEEAQAEVRRVFDGKGFVDETELHQLIYLKSVIKETLRLHPTAPLLIPRESRERSQINGYEIPAKTRVLINAYAIGRDPKYWVEAESFKPERFVNSPIDFKGTDFEFIPFGAGRRMCPGITFALPNVELPLAQLLYHFDWKLPNGMKNEELDMTESFGITVGRKHDLYLIPITRRT 506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g03980 506 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 440 449 IPR017972 GO:0005506|GO:0016705
Tsu05g03980 506 Gene3D Cytochrome P450 34 505 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu05g03980 506 PANTHER CYTOCHROME P450 71B11-RELATED 15 504 - -
Tsu05g03980 506 PANTHER CYTOCHROME P450 71D10 15 504 - -
Tsu05g03980 506 SUPERFAMILY Cytochrome P450 42 504 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu05g03980 506 Pfam Cytochrome P450 42 488 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu05g03980 506 PRINTS E-class P450 group I signature 447 470 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu05g03980 506 PRINTS E-class P450 group I signature 317 343 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu05g03980 506 PRINTS E-class P450 group I signature 360 378 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu05g03980 506 PRINTS E-class P450 group I signature 188 206 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu05g03980 506 PRINTS E-class P450 group I signature 437 447 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu05g03980 506 PRINTS E-class P450 group I signature 96 117 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu05g03980 506 PRINTS E-class P450 group I signature 72 91 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu05g03980 506 PRINTS E-class P450 group I signature 297 314 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu05g03980 506 PRINTS E-class P450 group I signature 401 425 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu05g03980 506 PRINTS P450 superfamily signature 447 458 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu05g03980 506 PRINTS P450 superfamily signature 308 325 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu05g03980 506 PRINTS P450 superfamily signature 438 447 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu05g03980 506 PRINTS P450 superfamily signature 361 372 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g03980 Tsu-Chr5 50771944 50773799 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu05g03980 20 502 Cytochrome P450 AT1G13110 41.010 1.46e-134 397
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g03980 - - gmx:606548 635.18