Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g03977 ATGAGAATAAATTATCTCACTATCATTTCTAATAAGTTCTATCATTTCTTCGTTCAATTGAAAAACCTCAAAACTACAATGTTGTCTTCACCAAACAAACCCAAACCCTTTCTTCCTTTGATAAATCGCATTGCTATTTATTTCCTTACCACTTTTTCGGACGCTACACGTCGCCCTAACGGCACTGTTAACCGCCGTTTTCTAGGTCTTTTAGACCGCAGCTATTCACCTAATGACACTCCAATTAACGGCGTTTTCACCAAAGATGTTACCGTTAACGCTGAACATAACGTTTGGTTCCGTCTTTTCACGCCCACCGAAGCCACTGCTGGAGATGAAACCAAAACAGCCTCTCTTCCGGTCATCATTTTCTTCCACGGCGGTGGATTTAGCTATCTCTCCCCGGCTTCAATCCCTTATGAGGCTGTTTGCCGTAGATTTTGCCGAAAAATCAATGCCGTTGTTGTCTCAGTCAACTACCGTCTCACACCGGAAAATCGGTACCCATCGCAATACAAAGATGGAGAATCCGTGTTGAAATTCCTCGACGAGAATAAATACATTTTACCAGAAAATGCTGACATTTCAAAATGTTTCATTGCCGGAGACAGTGCTGGTGCAAATATAGCACATCACATTGCGGTTCGGGTTTGCAAAGCGGGACTCCGAAATATCAAGGTAATCGGGTTGGTTTCGATCCAACCGTTTTTCGGAGGGGAGGAGCGGACTGAGGCGGAGATATTTCTCGAAGGATCGCCGTTGGTGTCAATGGCGAGGACAGATTGGTTGTGGAAGGTGTTTTTGCCTAAAGGATCAAATCGGGATCATGGTGCCGCCAATGTTAGTGGGCCGAATGCAGAGGATTTGTCGGGTTTGGATTATCCGGATACACTTGTTTTCGTGTCCGGGTTTGACCCGTTAAATGATTGGCAAAAAAGGTATTATGAATGGTTGAAAAAATGTGGTAAAAATGTTGAGTTGATTGAATATCCAACTATGATTCAtgctttttatatttttcctaatttacCTGAGGCTACTCGGTTGATTTTGCAAGTTAAGGATTTTATCATGAGAGTCTCCAACAATTCTAAATGA 1098 0.4208 MRINYLTIISNKFYHFFVQLKNLKTTMLSSPNKPKPFLPLINRIAIYFLTTFSDATRRPNGTVNRRFLGLLDRSYSPNDTPINGVFTKDVTVNAEHNVWFRLFTPTEATAGDETKTASLPVIIFFHGGGFSYLSPASIPYEAVCRRFCRKINAVVVSVNYRLTPENRYPSQYKDGESVLKFLDENKYILPENADISKCFIAGDSAGANIAHHIAVRVCKAGLRNIKVIGLVSIQPFFGGEERTEAEIFLEGSPLVSMARTDWLWKVFLPKGSNRDHGAANVSGPNAEDLSGLDYPDTLVFVSGFDPLNDWQKRYYEWLKKCGKNVELIEYPTMIHAFYIFPNLPEATRLILQVKDFIMRVSNNSK 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g03977 365 Pfam alpha/beta hydrolase fold 122 338 IPR013094 GO:0016787
Tsu05g03977 365 Gene3D alpha/beta hydrolase 22 358 IPR029058 -
Tsu05g03977 365 PANTHER CARBOXYLESTERASE 18-RELATED 31 360 - -
Tsu05g03977 365 PANTHER ARYLACETAMIDE DEACETYLASE 31 360 - -
Tsu05g03977 365 SUPERFAMILY alpha/beta-Hydrolases 77 357 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g03977 Tsu-Chr5 50729617 50730785 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu05g03977 33 357 Carbohydrate Esterase AT3G05120 36.826 1.11e-73 230
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g03977 - - gmx:102665243 481.1