Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g03975 ATGCAAGCCTTATGGTTGTCCTTGAAAGACAATGTCAAATGTGGAAACAAGCTCACTGATGTAATAAGAATGCCACCAAAATTTGGTAAAGGAAGTAGCTATGTTCAAGAAAAGGAGGACAAATTCaacaatgatgaagaagaagatgaagaagataatGTCCCCTTCATGAAAACTCCAGCTAGACTAGCTTTTTCCATGCCAAACAACAAACAAGCACGACTTTATGAGCTTGGTATTGGAGATCCATCAAGAAAAATTGTTGAGATGATATTTCAGAAAGCATGGATGAACACCTCAAAGCCACTAAGGATAAGAACAGTTCTTAGGGTAAGATACTCCGAAAAAGTCCTCGAAAGGTTTGAGAATTACAGAGAAAAAGTGAAGAAACAGTATCCAAGACATCCAAGAAGTACAGTAGATGGAAATGAATTGTTGAGATTCTTTGTTACTACAATGAAATGTTTCCCTGTGAAGAAAATTCATGATCTTTGTCATGATCCGTCGTGTCgcttttgtcaaataattcaatttaatttcgACGCGGAAAAGGAAGAGGTTCAGTTGAGTAATAGAAAAAGTGTGAATGCAAGAGTGAAGAATGTGAAAAGAGTTTCAATAGTTTGCAGAATAATTGCTGGAACTGCAGTGAATGAAGTTGATGGTAAATATGAAGAAGGGTTAGAGAATGATTCAATTAAGCTAGGTGAAATGCAATTTAGCTTAGAAAAATTTGTAGTGAAAAATCCTAGTTCTATTCTTCCTTGTTTTGTCATAATTTTCACCTGA 789 0.3333 MQALWLSLKDNVKCGNKLTDVIRMPPKFGKGSSYVQEKEDKFNNDEEEDEEDNVPFMKTPARLAFSMPNNKQARLYELGIGDPSRKIVEMIFQKAWMNTSKPLRIRTVLRVRYSEKVLERFENYREKVKKQYPRHPRSTVDGNELLRFFVTTMKCFPVKKIHDLCHDPSCRFCQIIQFNFDAEKEEVQLSNRKSVNARVKNVKRVSIVCRIIAGTAVNEVDGKYEEGLENDSIKLGEMQFSLEKFVVKNPSSILPCFVIIFT 262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g03975 262 Gene3D - 73 262 - -
Tsu05g03975 262 MobiDBLite consensus disorder prediction 31 53 - -
Tsu05g03975 262 PANTHER NUCLEIC ACID-BINDING PROTEIN 2 262 - -
Tsu05g03975 262 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 2 262 - -
Tsu05g03975 262 SUPERFAMILY ADP-ribosylation 75 262 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g03975 Tsu-Chr5 50718797 50720298 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu05g03975 56 260 C2H2 Transcription Factor Family AT5G54630 34.468 7.34e-28 109
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g03975 - - mtr:MTR_5g094440 426.017
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu05g03975 05 50718797 50720298 Tsu05g03975 05 50718797 50720298 ECH