Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g03967 ATGTCCAATTTCCATAAGTTTGAGGAGGAAGCTGAACTAGGGTCGGGTTCCCAAGAGGAGAAGGAGGAAGCACTACTAGATCTATCACCGCAGCAGGAGGAAGAATTGCAGGTTGAGGAGGTTGTTGAAGATAAATATGGAGGGCCTATATTGGAGTCAGATGGGTTAAAATTTGAAAACCCAACACCCTTTACTTATGGTGCGGGACACTTGCATCCTAATCGTGTCGTGGATCCGGGTAGAAAGCAACTAAGTCAATTCTACAAAAGACCTTATTCTCCTCCAAATTCATTTAATATAGGAGATTCCAATTATCCTTCAATCATCATTGTTGCTTTTGCTATTGGACATCCTACAACAATTAGTCAAACACTTAACAACGTTGGAACTCCAAGCACGTATTGGTTGCAAATTAAGGCACCACCTGAAGTTCAAATTTCAGTTCATCcacaaatattgaaatttgaaaaaaaggGGCAAATAAAGAAATTCAAAGTTACGGCGACATAG 510 0.3882 MSNFHKFEEEAELGSGSQEEKEEALLDLSPQQEEELQVEEVVEDKYGGPILESDGLKFENPTPFTYGAGHLHPNRVVDPGRKQLSQFYKRPYSPPNSFNIGDSNYPSIIIVAFAIGHPTTISQTLNNVGTPSTYWLQIKAPPEVQISVHPQILKFEKKGQIKKFKVTAT 169
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g03967 169 Gene3D - 78 169 - -
Tsu05g03967 169 Pfam Fibronectin type-III domain 102 168 IPR041469 -
Tsu05g03967 169 PANTHER SUBTILISIN-LIKE PROTEASE SBT5.4 82 167 - -
Tsu05g03967 169 PANTHER PEPTIDASE S8 82 167 - -
Tsu05g03967 169 MobiDBLite consensus disorder prediction 1 38 - -
Tsu05g03967 169 PANTHER SUBTILISIN-LIKE PROTEASE SBT5.4 44 80 - -
Tsu05g03967 169 MobiDBLite consensus disorder prediction 1 28 - -
Tsu05g03967 169 PANTHER PEPTIDASE S8 44 80 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g03967 Tsu-Chr5 50648196 50648812 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu05g03967 42 166 Subtilisin-like Serine Gene Family AT2G04160 31.507 7.30e-15 69.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g03967 - - lja:Lj4g3v1388200.1 117.857