Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Tsu05g03944 | ATGGGTTTTCATTTACCTAGTATCATCAGATCAAAGGCATCGTCTTCAAAAAGTGTCCCAAAGGGATATCTAGCTGTGTATGTAGGAGACAAAATGAAGAGGTTTGTGATTCCCGTATCATACTTGAACCAAATCTCATTTCAAGACTTGCTGAGCCAAACTGAAGAACAATTTGGATTTGAGCATCCAATGGGTGGTATAACTATTCCTTGCCGAGAAGATGTTTTCTTAGAAATCACTTCTAGCTTGAATTGA | 255 | 0.3804 | MGFHLPSIIRSKASSSKSVPKGYLAVYVGDKMKRFVIPVSYLNQISFQDLLSQTEEQFGFEHPMGGITIPCREDVFLEITSSLN | 84 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Tsu05g03944 | 84 | PANTHER | SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED | 1 | 84 | IPR003676 | GO:0009733 | |
| Tsu05g03944 | 84 | PANTHER | SMALL AUXIN-UP RNA-RELATED | 1 | 84 | - | - | |
| Tsu05g03944 | 84 | Pfam | Auxin responsive protein | 12 | 83 | IPR003676 | GO:0009733 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Tsu05g03944 | Tsu-Chr5 | 50349395 | 50349649 | Dispersed/Tandem |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Tsu05g03944 | 18 | 76 | Calmodulin-binding Proteins | AT3G43120 | 50.847 | 2.52e-17 | 70.1 |