Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g03941 ATGGGAAAGTGTTTTACAGCAGAGGAGCTTCAAAGATTAATAGATAATTACAACCAGAGTAGGTATGGTCAGGATGGTTATGGCACGGTGTACAAAGGATTGTTCCAGGATGGAATCGTAGTTGcagttaaaaaatcaaaaaagcTTGACAGAAACCAAATAGAAACTTTTGTCAATGAAGTAGTCATCTTGTCACAGATCAACCACAGAAACATAGTCAAACTCTTAGGTTGTTGTCTTGAGACAGAAACTCCATTACTTATAGATGAATATATCCCCAATGAAACACTTTCTCAACATATCAATAGGATAGATCATGACTCAACCCTTTCATGGGAAAGCCGCCTAAGAATTGCATGA 360 0.3583 MGKCFTAEELQRLIDNYNQSRYGQDGYGTVYKGLFQDGIVVAVKKSKKLDRNQIETFVNEVVILSQINHRNIVKLLGCCLETETPLLIDEYIPNETLSQHINRIDHDSTLSWESRLRIA 119
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g03941 119 PANTHER LYSM TYPE RECEPTOR KINASE 1 119 - -
Tsu05g03941 119 SUPERFAMILY Protein kinase-like (PK-like) 4 119 IPR011009 -
Tsu05g03941 119 ProSiteProfiles Protein kinase domain profile. 16 119 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu05g03941 119 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 1 119 IPR045274 GO:0007166
Tsu05g03941 119 Gene3D Transferase(Phosphotransferase) domain 1 1 119 - -
Tsu05g03941 119 Pfam Protein tyrosine and serine/threonine kinase 22 107 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g03941 Tsu-Chr5 50339432 50339791 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu05g03941 3 119 Receptor kinase-like Gene Family AT1G21230 58.475 1.39e-41 143
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Tsu05g03941 PK_Tyr_Ser-Thr 1e-14 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g03941 - - mtr:MTR_7g079350 188.348