Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g03940 ATGGGTTTTCGTTTATCCAGTATCATCAGATCAAAGGCATCATCTTCAAAAGGTGTCCCAAAGGGATATCTAGCTGTGTATGTAGGAGACAAAATGAAGAGGTTTGTGATTCCCGTATCATACTTGAACCAAATCTCATTTCAAGACTTACTGAGCCAAACTGAAGAACAATTTGGATTTGACCATCCAATGGGTGGTATAACTATTCCTTGCCGAGAAGATGTTTTCTTAGAAATCACTTCTAGCTTGAATTGA 255 0.3804 MGFRLSSIIRSKASSSKGVPKGYLAVYVGDKMKRFVIPVSYLNQISFQDLLSQTEEQFGFDHPMGGITIPCREDVFLEITSSLN 84
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g03940 84 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 1 84 IPR003676 GO:0009733
Tsu05g03940 84 PANTHER - 1 84 - -
Tsu05g03940 84 Pfam Auxin responsive protein 11 83 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g03940 Tsu-Chr5 50337193 50337447 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu05g03940 19 76 Calmodulin-binding Proteins AT3G43120 53.448 2.77e-18 72.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g03940 K14488 - gmx:100782363 127.102