Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g03937 ATGGGTTTCCGTTTAAATGCTATTCGACGGGCATCATTACCTACTGCCAACCAAACAACATCAAAATCTGCAGAAGTGAGAAAGGGGCATGTTGCAGTGTATGTTGGCGAGAAACAGAAGGGGTTTGTGATCCCAATATCATACTTGAACAAACTGTCATTTCAAGACTTATTGAGTCAAGCTGAAGAAGAGTTTGGATATGACCATCCCATGGGTGGCCTCACCATTCCTTGCACCGAAGATGCGTTTCAACACATAACTTCCAGCTTGAATGAGCTATGA 282 0.4326 MGFRLNAIRRASLPTANQTTSKSAEVRKGHVAVYVGEKQKGFVIPISYLNKLSFQDLLSQAEEEFGYDHPMGGLTIPCTEDAFQHITSSLNEL 93
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g03937 93 Pfam Auxin responsive protein 10 90 IPR003676 GO:0009733
Tsu05g03937 93 PANTHER AUXIN-INDUCED PROTEIN 6B 1 91 - -
Tsu05g03937 93 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 1 91 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g03937 Tsu-Chr5 50331710 50331991 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu05g03937 15 90 Calmodulin-binding Proteins AT3G43120 40.789 6.29e-16 66.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g03937 K14488 - gmx:100816803 144.05