Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g03922 ATGGCTACTCTTCTTCCTTCTTCCCTCACAAACCCCAATAAGCTTCTCTCATATTCTTCCCATTTCCACAATGCATCATTATCCAAAACGCAACGTTTCACTCGTCGTTTTGGGTCTGTTAAATGCTCTTTAGCTTATGTTGATAATGCTAAGATTAAGGTCGTTGGAATTGGGGGTGGTGGTAACAATGCTGTTAACCGCATGATTGGTAGTGGTTTGCAAGGTGTAGACTTCTATGCAATAAATACTGATGCTCAAGCGTTATTGCATTCAGCTGCGGAGAATCCTATTAAAATCGGAGAGCTTCTGACTCGTGGATTAGGTACTGGTGGGAATCCACTTTTGGGCGAACAAGCTGCAGAGGAATCAAAAGAAGCTATTGCTAATGCCCTTAAAGGATCGGATTTAGTGTTCATAACAGCTGGGATGGGTGGGGGTACAGGGTCTGGTGCTGCCCCAGTTGTGGCCCAAATATCAAAAGAGGCTGGTTACTTGACTGTTGGTGTTGTTACCTATCCTTTCAGTTTTGAAGGACGTAAAAGATCTTTACAGGCACTTGAAGCCATTGAAAAACTTCAGAAAAATGTCGATACACTTATTGTGATTCCAAATGACCGGCTGCTTGACATAGCTGATGAGCAGATGCCCCTTCAAGATGCTTTTCGTCTTGCAGATGATGTTTTACGCCAAGGAGTTCAGGGAATTTCAGACATTATAACAATACCTGGACTTGTGAATGTGGATTTTGCTGATGTAAAAGCTGTGATGAAAGACTCTGGTACTGCAATGCTTGGAGTGGGTGTTTCCTCCGGTAAAAACCGAGCAGAAGAAGCAGCAGAACAGGCTACTTTGGCCCCTTTAATTGGATCATCTATTCAATCAGCCACTGGGGTAGTGTATAATATTACCGGAGGAAAGGACATTACCCTGCAGGAAGTCAACAGGGTATCTCAGGTTGTGACTAGTTTGGCTGATCCTTCTGCCAATATTATATTTGGAGCTGTTGTTGATGATCGTTACACCGGAGAGATTCATGTGACTATCATTGCCACTGGCTTTTCACAATCTTTTCAGAAGAAGCTACTAACAGATCCAAGGGCTGCAAAACTTCTTGACAAAGTGGCCGAGGGAAAAGAAAGCTACCTGCAGGCTGCAGTTATCATTGGTCTTGTTTCTGCACTTTCTCTTTATACATGTCCTGTTCTCAAGTCCTCAAACATACCTTCCAAAGTTGAATCTAGAGCACCACACCAACCAAAGATTTCTATGGCCGAAAGTGCAAAGCGTCTCATCATTGGAATCGACCTCGGCACCACCTACTCTTGCGTAGGAGTCTGGCACCACGGAAGTGTCCAAATCATCACCAACGACCACGGCAACCGGACCACCCCTTCTTACGTAGCTTTCACAGACTCCGAACGCTTCATTGGCGATGCTGCCAAGATCCAGGTCACCAGGAACCCCGTAAACACAGTCTTCGATGCCAAGCGTTTGATTGGTAGGAGATTCTCTGATGCTTCCGTTCAGAGTGACATGAAGCTATGGCCATTCAAGGTTATTGCTGGTACTTCCGACAAACCTATGATTGTTGTTAACTACAAGAATGAGGAGAAGCAACTCACTGCTGAGGAGGTTTCCTCCATGGTCCTCATCAAGATGCGTGAGATCGCCGAGGCTTATCTTGGTTCCAGCGTGAAGGACGTTGTTGTTACTGTTCCAGCATACTTCAATGACTCTCAGCGCCAGGCCACCAAGGATGCTGGTGTCATTGCTGGCCTTAATGTCATGCGTATCATCAACGAACCCACTGCTGCAGCCCTTGCCTATGGCCTTGATATGGAGTGCACCGTTGATGATGTGAAGAACGTTTTGATTTTTGACCTTGGTGGTGGTACTTTTGATGTCTCTCTTCTGACCATTGAAGATAGTGTCTTTCAAGTTAATGCCACTGCAGGAGATGACCATCTTGGAGGTGAAGACTTCGATAACAGGATGGTTGAGAATTTCGTTGAGGAGTTCAAGCGGAAGCACGAGAAGGAAATTAGTGGGAACCCGAGGGCTTTAAGAAAGTTGAAGACCGCATGTGAAAGGGCAAAGAGGACACTCTCATCCACTGTACATACCACCATTGAGATTGACTCATTGTATGAAGGTATTGACTTCTATACCACAATCACTCGTAAAAGGTTTGAAGAACTCAACATGGACCTCTTCAGCAACTGCATGGACACTGTTGAGCAGTGTTTGAGGGACGCTAAAATGGACAAGAGCAGTGTCCATGATATTGTTCTTGTAGGTGGGTCTACGAGGATCCCAAAAGTGCAACAGTTGTTGCAGGATTTCTTCAATGGGAAGGAGCTCTGTAAGAGCATCAACCCAGATGAGGCTGTTGCTTATGGAGCTGCTCTTCAGGCGTGTATCTTGAGCCGTGAGGGGAACGAGAAGGTTAAGGAACTTACATTGGTGGATGTCGCTCCCCTTTCACTTGGTGTGGAAACTATTGGTGGTGTCATGACTGTCCTGATTCGAAAGAACTGTTCAATCCCTTACAAGAAGGAGCAGGTTTTCTCAACCTACTCTGACAACCAGCTTAGTGTGTTGATCAAGGTGTACGAGGGTGAGAGGACCATGACCAGGGACAACAACTTGCTAGGTAAATTCGAGCTTTCTGGCATCCTTCCTGCTCCAAGCGGTGTTCCTCAGATCAATGTTGGCTTTCAAATTGATCACAATGGGATCATGAATGTCTCTGCTGAGGACAAGGGTACAGGGAAGAAGAACAATATCACTATCACCAATGACAAGGGCAGGCTCTCGAAGGAGGAGATTGAGAAGATGGTGCAGGAGGCGGAGAAGTACAAGTCTGAGGATGAGGAGCACAAGAAGAACGTTGCGGCCAGGATTGCCTTGGAACAAGAGGGTGAGATGTGCTATTCTACAAAAGGAGCTCCAAATCAATACTTGGAGGCACGGGTAGAACATGATACTTGCCATGATCAGATTACATTACCATCCCCAAGTTCAAGTTTACAGTCTTTCCCTTCCGGAAACTTTGGGTATTATTTCAACTATACAAAAGTGGcttcacaaaaaattataaagggaCTAAAAGACGATAATTTCTATGTTATTGGATTGTATGGAAAGAGAGGCAGTGGTAAAACGGCATTGGTGAAAGCTGAGTTGGAAGAGTATGAAAAGATTTTCCGTAGAGTGATATTTCTCTCTGTGTCTGAGAATCAAGATATCAAGAGCATTCAAGTGGGAATTTCTACCTCCTTGAATGTGTTTGATAAAGATGACAGTGATGGTGCGagaataatgaaaataattttggcATTACAAAGGAAGGATAGAACTACCCTAGTCATCTTGGATAATTTTCCGTCAAAGTCTAAACTGGAAGAATTGGGAATTCCTTATAATAGCAAACAGTACAAGTTCCTTTTGACTGCACGTAATGAGGCAGAGTGCACCTTAATGGGATGTGATCATTTGATTATTCTGAAGCCCTTATCTGATGAAGAAGCTTTTACCCTGCTACATAAACTGTCCGGTGTTGAATCCCAAATTGATCTATTTAAAGTGGTACGAGATGTTGCTTTTAAATGCAATGGCTTACCTGGTTTAATTAAAGATGTGGCGTTTTCCTTGGAAAAGAAGCCTATTGAGAAGTGGGAAGAATCCTTAGTCAGTCTAAGCCACTCAACGGCACACTAccaaatttttataagttttagAGGAAAGGACACTCGGAAGATTTTCACAAATCATCTGTATGAGGCTTTGTGTAAAGAGGGATTCAAGACCTTCATAGATGATGAAGCATTGGAGGGTGGATCCCCAATTGATAAGCTTCTTGAAGCCATTGAAGAGTCAAGGTTTGCAATTGTTGTTTTGTCAGAAAATTTTGCAGACTCTAAATGGTGTCTTAAAGAACTTGTCAAGATTCTTGATTGTCGAAAAAGGAAGAAACAATTggttttgccaattttttatgAAGTGGAACCAACCGACATAAGGCATCTAAAAGGGAGGTATGGTGAAGCTATGGCCGAACATGAAAAAAAGTTAGCCAAAGATTCTAAGACGGTATTGGAATGGACATTAGCTTTGAGTGATATTTCCCAATTGAAAGGAGAAAATTTCCACATTTCCAACTTCAAAGGAGAGCAATACGAAAGATTCCCAAGGCACTACAGGAACCTATACCTATTCCACCACTTAGCAGAATATGAGCCTCCTACAATCCAGGCACCTGAAGCCATTGAAAAGCTTCAGAAAAATGTCGATACACTTATTGTGATTCTAAATGACCGGCTGCTTGACATAGCTGATGAGCAGATGCCCCTTCAAGATGCTTTTCATCTTGCGGATGATGTTTTACGCCAAGGAGTTCAGGGAATTTCGGACATTATAACATTACCTAGACTTGTGAATGTAGATTTTGCTGATGTAAAAGCTGTGACGAAAGACTCTGGTACTGCAATGCTCGGAGTTCTGACTAGTTTGGCTGATCCTTCTGCCAATATTATATTTGGAGCTGTTGTTGATCATCGTTACACCGGAGAGATTCATGTAACTATCATTGCAACTGGTTTTTCACAATCTTTTCAGATGAAGCTGCTAACAGATCCAAGGGCTGCAAAACTTCTTGACAAAGTAGCCGAGGGAAAAGAAAGCAAGACAGTGCCCTCTCCCCTCAAGTCCTCAAACTTATCTTCCAAAGTTGAATCTAGAGCACCACCTGCACGAAAGCTCTTTTTTTAG 4770 0.4283 MATLLPSSLTNPNKLLSYSSHFHNASLSKTQRFTRRFGSVKCSLAYVDNAKIKVVGIGGGGNNAVNRMIGSGLQGVDFYAINTDAQALLHSAAENPIKIGELLTRGLGTGGNPLLGEQAAEESKEAIANALKGSDLVFITAGMGGGTGSGAAPVVAQISKEAGYLTVGVVTYPFSFEGRKRSLQALEAIEKLQKNVDTLIVIPNDRLLDIADEQMPLQDAFRLADDVLRQGVQGISDIITIPGLVNVDFADVKAVMKDSGTAMLGVGVSSGKNRAEEAAEQATLAPLIGSSIQSATGVVYNITGGKDITLQEVNRVSQVVTSLADPSANIIFGAVVDDRYTGEIHVTIIATGFSQSFQKKLLTDPRAAKLLDKVAEGKESYLQAAVIIGLVSALSLYTCPVLKSSNIPSKVESRAPHQPKISMAESAKRLIIGIDLGTTYSCVGVWHHGSVQIITNDHGNRTTPSYVAFTDSERFIGDAAKIQVTRNPVNTVFDAKRLIGRRFSDASVQSDMKLWPFKVIAGTSDKPMIVVNYKNEEKQLTAEEVSSMVLIKMREIAEAYLGSSVKDVVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAALAYGLDMECTVDDVKNVLIFDLGGGTFDVSLLTIEDSVFQVNATAGDDHLGGEDFDNRMVENFVEEFKRKHEKEISGNPRALRKLKTACERAKRTLSSTVHTTIEIDSLYEGIDFYTTITRKRFEELNMDLFSNCMDTVEQCLRDAKMDKSSVHDIVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEAVAYGAALQACILSREGNEKVKELTLVDVAPLSLGVETIGGVMTVLIRKNCSIPYKKEQVFSTYSDNQLSVLIKVYEGERTMTRDNNLLGKFELSGILPAPSGVPQINVGFQIDHNGIMNVSAEDKGTGKKNNITITNDKGRLSKEEIEKMVQEAEKYKSEDEEHKKNVAARIALEQEGEMCYSTKGAPNQYLEARVEHDTCHDQITLPSPSSSLQSFPSGNFGYYFNYTKVASQKIIKGLKDDNFYVIGLYGKRGSGKTALVKAELEEYEKIFRRVIFLSVSENQDIKSIQVGISTSLNVFDKDDSDGARIMKIILALQRKDRTTLVILDNFPSKSKLEELGIPYNSKQYKFLLTARNEAECTLMGCDHLIILKPLSDEEAFTLLHKLSGVESQIDLFKVVRDVAFKCNGLPGLIKDVAFSLEKKPIEKWEESLVSLSHSTAHYQIFISFRGKDTRKIFTNHLYEALCKEGFKTFIDDEALEGGSPIDKLLEAIEESRFAIVVLSENFADSKWCLKELVKILDCRKRKKQLVLPIFYEVEPTDIRHLKGRYGEAMAEHEKKLAKDSKTVLEWTLALSDISQLKGENFHISNFKGEQYERFPRHYRNLYLFHHLAEYEPPTIQAPEAIEKLQKNVDTLIVILNDRLLDIADEQMPLQDAFHLADDVLRQGVQGISDIITLPRLVNVDFADVKAVTKDSGTAMLGVLTSLADPSANIIFGAVVDHRYTGEIHVTIIATGFSQSFQMKLLTDPRAAKLLDKVAEGKESKTVPSPLKSSNLSSKVESRAPPARKLFF 1589
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g03922 1589 ProSitePatterns Heat shock hsp70 proteins family signature 3. 762 776 IPR018181 -
Tsu05g03922 1589 ProSitePatterns Tubulin subunits alpha, beta, and gamma signature. 144 150 IPR017975 GO:0005525|GO:0005874|GO:0007017
Tsu05g03922 1589 SUPERFAMILY Tubulin C-terminal domain-like 1479 1542 IPR008280 -
Tsu05g03922 1589 Gene3D - 614 788 - -
Tsu05g03922 1589 Gene3D Tubulin/FtsZ, GTPase domain 45 258 IPR036525 -
Tsu05g03922 1589 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1030 1234 IPR027417 -
Tsu05g03922 1589 TIGRFAM ftsZ: cell division protein FtsZ 48 361 IPR000158 GO:0003924|GO:0005525
Tsu05g03922 1589 Pfam TIR domain 1240 1377 IPR000157 GO:0007165
Tsu05g03922 1589 PANTHER CELL DIVISION PROTEIN FTSZ-RELATED 1500 1589 IPR045061 GO:0003924|GO:0005525
Tsu05g03922 1589 PANTHER CELL DIVISION PROTEIN FTSZ-RELATED 1416 1500 IPR045061 GO:0003924|GO:0005525
Tsu05g03922 1589 PANTHER CELL DIVISION PROTEIN FTSZ-RELATED 1 381 IPR045061 GO:0003924|GO:0005525
Tsu05g03922 1589 ProSitePatterns FtsZ protein signature 1. 82 116 IPR020805 GO:0005525
Tsu05g03922 1589 MobiDBLite consensus disorder prediction 1558 1589 - -
Tsu05g03922 1589 Pfam Hsp70 protein 431 990 IPR013126 GO:0005524|GO:0140662
Tsu05g03922 1589 Gene3D - 1243 1396 IPR035897 -
Tsu05g03922 1589 PANTHER CELL DIVISION FTSZ-LIKE PROTEIN 1500 1589 - -
Tsu05g03922 1589 Hamap Cell division protein FtsZ [ftsZ]. 47 377 IPR000158 GO:0003924|GO:0005525
Tsu05g03922 1589 SUPERFAMILY Tubulin nucleotide-binding domain-like 50 246 IPR036525 -
Tsu05g03922 1589 Pfam NB-ARC domain 1030 1239 IPR002182 GO:0043531
Tsu05g03922 1589 CDD HSPA1-2_6-8-like_NBD 432 809 - -
Tsu05g03922 1589 Gene3D Tubulin/FtsZ, GTPase domain 1410 1535 IPR036525 -
Tsu05g03922 1589 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 808 989 IPR029047 -
Tsu05g03922 1589 SMART Tubulin_C_4 245 362 IPR018316 -
Tsu05g03922 1589 Pfam Tubulin/FtsZ family, GTPase domain 51 211 IPR003008 GO:0005525
Tsu05g03922 1589 Gene3D Actin; Chain A, domain 4 657 740 - -
Tsu05g03922 1589 SUPERFAMILY Tubulin C-terminal domain-like 245 360 IPR008280 -
Tsu05g03922 1589 Gene3D - 1171 1242 IPR042197 -
Tsu05g03922 1589 SUPERFAMILY Toll/Interleukin receptor TIR domain 1233 1378 IPR035897 -
Tsu05g03922 1589 CDD FtsZ_type1 64 352 IPR000158 GO:0003924|GO:0005525
Tsu05g03922 1589 Gene3D - 432 805 - -
Tsu05g03922 1589 MobiDBLite consensus disorder prediction 1564 1578 - -
Tsu05g03922 1589 ProSitePatterns FtsZ protein signature 2. 135 156 IPR020805 GO:0005525
Tsu05g03922 1589 Gene3D - 259 365 IPR037103 -
Tsu05g03922 1589 SMART AAA_5 1040 1172 IPR003593 -
Tsu05g03922 1589 Coils Coil 943 963 - -
Tsu05g03922 1589 SMART Tubulin_4 51 243 IPR003008 GO:0005525
Tsu05g03922 1589 PRINTS 70kDa heat shock protein signature 458 470 - -
Tsu05g03922 1589 PRINTS 70kDa heat shock protein signature 568 588 - -
Tsu05g03922 1589 PRINTS 70kDa heat shock protein signature 759 775 - -
Tsu05g03922 1589 PRINTS 70kDa heat shock protein signature 791 811 - -
Tsu05g03922 1589 PRINTS 70kDa heat shock protein signature 818 837 - -
Tsu05g03922 1589 PRINTS 70kDa heat shock protein signature 430 443 - -
Tsu05g03922 1589 PRINTS 70kDa heat shock protein signature 480 488 - -
Tsu05g03922 1589 PRINTS 70kDa heat shock protein signature 631 641 - -
Tsu05g03922 1589 PRINTS 70kDa heat shock protein signature 899 915 - -
Tsu05g03922 1589 ProSiteProfiles TIR domain profile. 1238 1407 IPR000157 GO:0007165
Tsu05g03922 1589 SUPERFAMILY Actin-like ATPase domain 429 613 IPR043129 -
Tsu05g03922 1589 SUPERFAMILY Actin-like ATPase domain 621 809 IPR043129 -
Tsu05g03922 1589 ProSitePatterns Heat shock hsp70 proteins family signature 1. 434 441 IPR018181 -
Tsu05g03922 1589 Gene3D - 493 548 - -
Tsu05g03922 1589 SUPERFAMILY Tubulin nucleotide-binding domain-like 1413 1480 IPR036525 -
Tsu05g03922 1589 SMART till_3 1239 1378 IPR000157 GO:0007165
Tsu05g03922 1589 Gene3D - 1017 1167 IPR027417 -
Tsu05g03922 1589 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 814 971 IPR029047 -
Tsu05g03922 1589 ProSitePatterns Heat shock hsp70 proteins family signature 2. 625 638 IPR018181 -
Tsu05g03922 1589 Pfam FtsZ family, C-terminal domain 260 353 IPR024757 -
Tsu05g03922 1589 PANTHER CELL DIVISION FTSZ-LIKE PROTEIN 1416 1500 - -
Tsu05g03922 1589 PANTHER CELL DIVISION FTSZ-LIKE PROTEIN 1 381 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g03922 Tsu-Chr5 50218956 50228723 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu05g03922 423 971 Calmodulin-binding Proteins AT3G12580 79.964 0.0 910
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g03922 K03283 - lja:Lj0g3v0120799.1 1045.8