Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g03918 ATGGCTGAAAATGCAAAGCGTTTCATCATCGGAATCGACCTCGGTACCACCTACTCTTGCGTCGGAGTCTGGCACCGTGACACTGTCCAAATCATCACTAACGACCACGGCAACCGGACCACCCCTTCTTACGTTGCTTTCACTGACTCCGAACGCTTCATTGGCGATGCTGCCAAGATCCAGGTCACCAGGAACCCCCTCAACACTGTCTTCGATGCCAAGCGTTTGATTGGAAGGAGATTCTCTGATGCTTCCGTTCAGAGTGATATGAAGCTATGGCCATTCAAGGTTATTGCTGGTACTTCCGACAAGCCTATCATTGTTGTTAGCTACAAGAATGAGGAGAAGCACTTCACTGCTGAGGAGATTTCCTCCATGGTCCTCGTCAAGATGCGTCAGATCGCCGAGGATTATCTTGGATCCACTGTGAAGGATGTTGTTGTCACTGTTCCAGCGTACTTCAATGACTCTCAACGCCAGGCCACCAAGGATGCCGGCGTCATCGCCGGCCTTAATGTCATGCGTATCATCAACGAACCCACTGCAGCTGCCCTTGCCTATGGCCTTGATATGGAGCCCGTCATTGATGATGAGATGAACGTTTTGATTTTTGACCTTGGTGGTGGTACTTTTGATGTCTCTCTTCTATCCATTGTAGACAGTGTCGTTGAAGTTCTTGCCACTGCAGGAGACAACCATCTTGGAGGTGAAGACTTCGATAACAGGATGGTTGAgaattttgttgaggagtttaAGCGGAAGCACGAGAAGGAAATTAGTGGGAACCCGAGGGCTTTAAGAAAGTTGAGGACCGCATGTGAAAGGGCAAAGAGGATACTCTCATCCACTATACATACCACCATTGAGATTGACTCATTGTATGAAGGTATTGACTTCTATACCACAATCACTCGTGACAGATTTGAAGAACTCAACATGGACCTCTTCAGCAACTGCATGGACACTGTTGAGCGGTGTTTGAGGGACGCTGAAATGGACAAGAGCAGTGTCCATGATATTGTTCTTGTTGGTGGGTCTACGAGGATCCCAAAAGTGCAACAGCTGTTGCAGGATTTCTTCAATGGGAAGGAGCTCTGCAAAAGCATTAACCCAGACGAGGCTGTTGCTTATGGAGCTGCTCTTCAGGCTGCTATCTTGAACCGTGAGGAGAGCGAGAAGGTTAACGAACTTACGTTGGTGGATGTCACTCCCCTTTCAGTTGGTGTGGAAACTGTTGGTGGTGTCATGACTGCCCTGATTCGAAAGAACTGTTCAATCCCGCACAAGAAGGAGCGGGTTTTCTCAACCTACTCTGACAACCAGCTTAGTGTGTCGATCAAGGTGTACGAGGGTGAGAGAACCAGTACCAGGGACAACAACTTGCTAGGTAAATTCGAGCTTTCTGGCATCCTTCCTGCTCCAAGGGGTGTTCCTCAGATCAATGTTTGCTTTCAAATTGATCACAATGGTATCATGAACGTCTCTGCTGAGGACAAGGCTACAGGGAACAAGAACAATATCACTATCACCAATGACAAGGGCAGGCTCTCGAAGGAGGAGATTGAGAAGATGGTGCAGGAAGCGGAGAAGTACATGGCTGAGGATGAGGAGCACAAGAAGAATGTTGAGGCCAAGATTGCCTTGGAACAAACAGTGGTGAGGTACTGTTTTACAAAAGGTGCTCCAGATCAACTCTTGGAGGCACAAGTAGAACACGATACTTGCCATGATCAGATTACATTACCATCCCTAAGTTCAAGTTTACAGTCTTTCCCTTCCGGAAACTTTGGGTATTATTTCAACTCGACAAAAGTGGcttcacaaaaaattataaagggaCTAAAAGACGATAATTGCTATGTTATTGGATTGTATGGAAAGAGAGGCAGTGGTAAAACATCATTGGTGAAAGCTGAGATGGAAGAGTATGAAAAGATTTTCCGTAGAGTGATATTTTTCTCCGTGTCTGAGAATCAAGATATCAAGAGCATTCGAATGGGAATTTCTAGCTCCTTGAATGTGTTTGATAAAGATGACAGTGATGGTGCGagaataatgaaaataattgtgGCATTAGAAAAGAAGGATAGAACTACCCTAGTCATCTTGGATAATTTTCCGTCAAAGTCTAAACTGGAAGAATTGGGAATTCCTTATAATAACAAACAGTACAAGTTTCTTTTGACCGCACGTGATGAGAAAGAGTGCACCTTAATGGGATGTGATAATTTGATTCTTCTGAAGCCCTTATCTGATGAAGAAGCTTTTACCCTGCTGCATAAACTGTCCGGTGTTGAATCGCAAATTGATCTATTTAAAGTGGTACGAGATGTTGCTTTTAAATGCAATGGCTTACCTGGTTTAATTAAAGATGTGGCGTTTTCCTTGAATAAGAAGCCTATTGAGAAGTGGGAAGAATCCTTATTAGCCAAAGATTCTAAGACGGTATTGGAATGGACATTAGCTTTGAGTGATATTTCCCAATTGAAAGGAGAACATTTCTGCATTTCCAACTTCAAAGGAGAACATAACGAAAGGTACAGAGATCAACTTATTGGAAAGATCACAAGATTTGCCCATAATAACATACATCGCTTGCATATACAAAGCATGTCAAGCACTCTCCTTGCATCTCCTATACCCTTCATAGTTTTATTGAGGTTTGGCCTTCGATTCCAATTGCTTGATAGTGTTGCCGGTACCGGCGGGAATCCGCTTTTAAGAGAACAAGCCGCGGAGGAGTCAAAAGAAGCTATTGCTAATGCCCTTAAAGGGTCGGATTTGATGTTCATAACAGCTGGGATGGGTGGGGGACGTAAAAGATCCTTACAGGCACTTGAAGCCATTGAAAAACTTCAGAAAAATGTTGATACACTTATTATGATTCCAAATGACCGACTGCTTGACATAGCTGATGAGCAGATGTCACTTCAATATGCTTTTCATCTTGCAGATGATGTTTTACGCGAAGGAGTTCAGGGAATTTCAGACATTATAAATACCTGGACTTGTGAATGTGGATTTTGCTGA 3030 0.4333 MAENAKRFIIGIDLGTTYSCVGVWHRDTVQIITNDHGNRTTPSYVAFTDSERFIGDAAKIQVTRNPLNTVFDAKRLIGRRFSDASVQSDMKLWPFKVIAGTSDKPIIVVSYKNEEKHFTAEEISSMVLVKMRQIAEDYLGSTVKDVVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAALAYGLDMEPVIDDEMNVLIFDLGGGTFDVSLLSIVDSVVEVLATAGDNHLGGEDFDNRMVENFVEEFKRKHEKEISGNPRALRKLRTACERAKRILSSTIHTTIEIDSLYEGIDFYTTITRDRFEELNMDLFSNCMDTVERCLRDAEMDKSSVHDIVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEAVAYGAALQAAILNREESEKVNELTLVDVTPLSVGVETVGGVMTALIRKNCSIPHKKERVFSTYSDNQLSVSIKVYEGERTSTRDNNLLGKFELSGILPAPRGVPQINVCFQIDHNGIMNVSAEDKATGNKNNITITNDKGRLSKEEIEKMVQEAEKYMAEDEEHKKNVEAKIALEQTVVRYCFTKGAPDQLLEAQVEHDTCHDQITLPSLSSSLQSFPSGNFGYYFNSTKVASQKIIKGLKDDNCYVIGLYGKRGSGKTSLVKAEMEEYEKIFRRVIFFSVSENQDIKSIRMGISSSLNVFDKDDSDGARIMKIIVALEKKDRTTLVILDNFPSKSKLEELGIPYNNKQYKFLLTARDEKECTLMGCDNLILLKPLSDEEAFTLLHKLSGVESQIDLFKVVRDVAFKCNGLPGLIKDVAFSLNKKPIEKWEESLLAKDSKTVLEWTLALSDISQLKGEHFCISNFKGEHNERYRDQLIGKITRFAHNNIHRLHIQSMSSTLLASPIPFIVLLRFGLRFQLLDSVAGTGGNPLLREQAAEESKEAIANALKGSDLMFITAGMGGGRKRSLQALEAIEKLQKNVDTLIMIPNDRLLDIADEQMSLQYAFHLADDVLREGVQGISDIINTWTCECGFC 1009
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g03918 1009 SUPERFAMILY Tubulin nucleotide-binding domain-like 895 1000 IPR036525 -
Tsu05g03918 1009 CDD HSPA1-2_6-8-like_NBD 10 387 - -
Tsu05g03918 1009 Gene3D Tubulin/FtsZ, GTPase domain 939 1003 IPR036525 -
Tsu05g03918 1009 Gene3D - 192 366 - -
Tsu05g03918 1009 Gene3D - 749 824 IPR042197 -
Tsu05g03918 1009 Gene3D - 597 744 IPR027417 -
Tsu05g03918 1009 SMART Tubulin_4 854 1003 IPR003008 GO:0005525
Tsu05g03918 1009 ProSitePatterns Heat shock hsp70 proteins family signature 1. 12 19 IPR018181 -
Tsu05g03918 1009 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 608 808 IPR027417 -
Tsu05g03918 1009 Pfam Hsp70 protein 9 554 IPR013126 GO:0005524|GO:0140662
Tsu05g03918 1009 ProSitePatterns Heat shock hsp70 proteins family signature 3. 340 354 IPR018181 -
Tsu05g03918 1009 Coils Coil 518 545 - -
Tsu05g03918 1009 SUPERFAMILY Actin-like ATPase domain 196 386 IPR043129 -
Tsu05g03918 1009 PANTHER HEAT SHOCK COGNATE 70 KDA PROTEIN 2-LIKE 7 551 - -
Tsu05g03918 1009 PRINTS 70kDa heat shock protein signature 146 166 - -
Tsu05g03918 1009 PRINTS 70kDa heat shock protein signature 209 219 - -
Tsu05g03918 1009 PRINTS 70kDa heat shock protein signature 337 353 - -
Tsu05g03918 1009 PRINTS 70kDa heat shock protein signature 396 415 - -
Tsu05g03918 1009 PRINTS 70kDa heat shock protein signature 36 48 - -
Tsu05g03918 1009 PRINTS 70kDa heat shock protein signature 58 66 - -
Tsu05g03918 1009 PRINTS 70kDa heat shock protein signature 8 21 - -
Tsu05g03918 1009 PRINTS 70kDa heat shock protein signature 369 389 - -
Tsu05g03918 1009 PRINTS 70kDa heat shock protein signature 477 493 - -
Tsu05g03918 1009 Pfam NB-ARC domain 608 806 IPR002182 GO:0043531
Tsu05g03918 1009 ProSitePatterns Heat shock hsp70 proteins family signature 2. 203 216 IPR018181 -
Tsu05g03918 1009 Gene3D - 10 384 - -
Tsu05g03918 1009 Gene3D - 71 126 - -
Tsu05g03918 1009 Gene3D Actin; Chain A, domain 4 235 318 - -
Tsu05g03918 1009 Gene3D Tubulin/FtsZ, GTPase domain 886 938 IPR036525 -
Tsu05g03918 1009 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 385 558 IPR029047 -
Tsu05g03918 1009 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 392 549 IPR029047 -
Tsu05g03918 1009 PANTHER HEAT SHOCK PROTEIN 70KDA 7 551 IPR013126 GO:0005524|GO:0140662
Tsu05g03918 1009 SUPERFAMILY Actin-like ATPase domain 7 191 IPR043129 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g03918 Tsu-Chr5 50188533 50194534 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu05g03918 1 549 Calmodulin-binding Proteins AT3G12580 78.324 0.0 888
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu05g03918 05 50188533 50194534 Tsu05g03918 05 50188533 50194534 ECH