Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g03894 ATGTCGTCTTCAGAGATTCTCCAAGAACTTGAATCACTCAAAAACGAAAAGACCAAAATTGAACACAAAATATCACTTCTTGAAGCTCAATTGAAAGATATTAATCTCCAAAAACAAGTTTCTGCATCATCCAATGGTTCTTCACCTTACGCTACAAATGGTTTAGAACCTCACATGATTCATAGATACAGTCGCCACCTTGTTCTTCCTTCTTTTGGTGTTCAAGGGCAAGCAAATCTATTGAAGTCATCAATTTTAGTTGTGGGAGCTGGAGGATTGGGTGCCCCTGCGTTGTTATATTTTGCAGCTTCTGGTGTTGGTAAATTGGGTATTGTTGATCATGACAAGGTTGAGCTGAATAATATGCATAGACAGATTATACACACCGAAGCATATATTGGTCAGCCAAAAGTGAAATCCGCTGCTGCTGCTTGTCGTTCGGTCAACTCATCTATTGAAGTCGTGGAACATCAAGAAGCTTTGCGGACTTCCAATGCTTTGGAAATTTTCAGCAAATACGATATAATAGTGGATGCAACAGATAATGCTCCCACCCGGTATATGATCAGTGACTGCTGTGTAGTACTCGGAAAGCCCCTTGTATCAGGTGCTGCTGTAGGATTGGAAGGGCAGCTCACTATCTACAATCACAATGGTGGCCCTTGTTATCGATGTCTCTTTCCAACGCCACCACCTAGAACAGCATGCCAAAGTTGTGCCGACGCTGGTGTACTAGGAGTAGTTCCTGGTATAATTGGCTGTCTCCAAGCTCTCGAGGCAATTAAGATTGCAGCTTCTGTTGGTGAACCACTCTCCGGAAGAATGCTTCTCTTTGATGCATTGTCTGCACGGATCCGTATTGTTAAAATCAGAGGAAGGTCAATGCAATGTGAAGCTTGTGGAGAAAATTCAACATTCAATCAGCAGTACTTCCGAGAATTTGATTACGAGAAGTTTACTCAGACTCCTTTATGTGTGCCTCCTTTGAAGTTAAATCTACTTCCTAGTGAATCAAGAATCAGCAGTAAGGAGTACAGCGAAATAATTCTCAACAAGGAACCACATGTATTGGTTGATGTTAGACCAGCTCACCATTTCAAGATTGTGTCACTTCCAAATTCCTTGAACATTCCATTCTCAACTTTAGAGTCTCGGTTGCCGGAAATATCGTCAATTTTGAAGAAAGATGAAGAGGAAAAAGACGCGGTTTCTGAATCAAGTGCACCACCATTATATGTAGTATGCAGGAGAGGAAATGATTCTCAAAGGGCTGTTCAATACCTTCACAAAATGGGTTTTAATTCTGCTAAGGATATTGTTGGAGGTGTAGAGTCTTGGGCTCAAAATGTTGATCCTAACTTCCCTACTTATTAG 1374 0.4127 MSSSEILQELESLKNEKTKIEHKISLLEAQLKDINLQKQVSASSNGSSPYATNGLEPHMIHRYSRHLVLPSFGVQGQANLLKSSILVVGAGGLGAPALLYFAASGVGKLGIVDHDKVELNNMHRQIIHTEAYIGQPKVKSAAAACRSVNSSIEVVEHQEALRTSNALEIFSKYDIIVDATDNAPTRYMISDCCVVLGKPLVSGAAVGLEGQLTIYNHNGGPCYRCLFPTPPPRTACQSCADAGVLGVVPGIIGCLQALEAIKIAASVGEPLSGRMLLFDALSARIRIVKIRGRSMQCEACGENSTFNQQYFREFDYEKFTQTPLCVPPLKLNLLPSESRISSKEYSEIILNKEPHVLVDVRPAHHFKIVSLPNSLNIPFSTLESRLPEISSILKKDEEEKDAVSESSAPPLYVVCRRGNDSQRAVQYLHKMGFNSAKDIVGGVESWAQNVDPNFPTY 457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g03894 457 Coils Coil 3 37 - -
Tsu05g03894 457 SMART rhod_4 341 452 IPR001763 -
Tsu05g03894 457 CDD RHOD_ThiF 331 457 - -
Tsu05g03894 457 Gene3D - 338 457 IPR036873 -
Tsu05g03894 457 ProSiteProfiles Rhodanese domain profile. 351 455 IPR001763 -
Tsu05g03894 457 SUPERFAMILY Activating enzymes of the ubiquitin-like proteins 60 424 IPR035985 GO:0008641
Tsu05g03894 457 Pfam ThiF family 63 298 IPR000594 -
Tsu05g03894 457 Pfam Rhodanese-like domain 343 448 IPR001763 -
Tsu05g03894 457 CDD ThiF_MoeB_HesA_family 62 290 - -
Tsu05g03894 457 Gene3D - 57 307 - -
Tsu05g03894 457 PANTHER UBIQUITIN-ACTIVATING ENZYME E1 2 442 IPR045886 -
Tsu05g03894 457 PANTHER ADENYLYLTRANSFERASE AND SULFURTRANSFERASE MOCS3 2 442 - -
Tsu05g03894 457 Hamap Adenylyltransferase and sulfurtransferase MOCS3 [MOCS3]. 1 457 IPR028885 GO:0002143|GO:0004792|GO:0005829
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g03894 Tsu-Chr5 49955273 49961138 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu05g03894 101 457 Sulfurtransferasese or Rhodanese AT5G55130 72.829 0.0 557
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu05g03894 05 49955273 49961138 Tsu05g03894 05 49955273 49961138 ECH