Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g03877 ATGGGAGAAAAAgattttacatcaaaactattaGGGTTTGTTGGCAAAGAGTGTGTGGTCCTTGAGTCCTTGCTACTTTTGAATGATCCATTGTATGGTGCTCTTCATTCAAAGAACAATGTCCCTATTCCTGTTTCCGGAACCAACCTCCAAGAGTTTAGGGAAATCGTCGCAATGAAGAAAGTAAGAAGCGATCGATCAAAGAGAACAGATTACAATAATCTTTCTTCAAAGTTTAAGGTTACTTCTTGTACAAGCAACAATGAGGAGGATGTtggaaaaataatattcaaGGAAAAAACAAGTGAAGGGATCAAGAatatcaagaaaagaaaagcaaTGGGTGAGGGATCAAGAAATTTGTCGAAGAAATACAAGAATCGAGAGAAAGAAGAGGTGCAAGAAGAACAACCCAATCTTCCATTGGcgtttaaagaaaaaattgaacaacTGGAAGGTAATGATGTGAAGTTGGTGATCCAGAAGAAATTAACTATGACTGATGTGACACGAAACAACGGTCGATTATCCATTCCAATAGGTAAGAAGATCGAAGAGGGTAGTCTTTTGACACAAGAGGAGGGATTGTATTTGGATTATGTGCCTCAAAAGAAAGGGAAGCATAGGCTTGATGGTATGTCTGTATCTATGTTGGATACTAATCTTAAACTTTGGGATGACATGTGCTTCAAGAAGTGGAAAATGGGGAAATCCGAGGTCTACAATATCACGGGTGGATGGTACAAACTTGTAGTAGAAAACCATTTGGAAAAAGATCAAAAGATACaactttggtcttttaaaaGAGACAATCATCTCAATTTCGCACTCGTCAAACTTTAG 843 0.3476 MGEKDFTSKLLGFVGKECVVLESLLLLNDPLYGALHSKNNVPIPVSGTNLQEFREIVAMKKVRSDRSKRTDYNNLSSKFKVTSCTSNNEEDVGKIIFKEKTSEGIKNIKKRKAMGEGSRNLSKKYKNREKEEVQEEQPNLPLAFKEKIEQLEGNDVKLVIQKKLTMTDVTRNNGRLSIPIGKKIEEGSLLTQEEGLYLDYVPQKKGKHRLDGMSVSMLDTNLKLWDDMCFKKWKMGKSEVYNITGGWYKLVVENHLEKDQKIQLWSFKRDNHLNFALVKL 280
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g03877 280 MobiDBLite consensus disorder prediction 110 137 - -
Tsu05g03877 280 PANTHER DOMAIN PROTEIN, PUTATIVE (DUF313)-RELATED 85 280 - -
Tsu05g03877 280 SUPERFAMILY DNA-binding pseudobarrel domain 159 276 IPR015300 -
Tsu05g03877 280 MobiDBLite consensus disorder prediction 110 136 - -
Tsu05g03877 280 Gene3D - 149 277 IPR015300 -
Tsu05g03877 280 PANTHER B3 DOMAIN PLANT PROTEIN-RELATED 85 280 IPR005508 GO:0003677
Tsu05g03877 280 Pfam B3 domain-containing protein At2g31720-like 149 251 IPR005508 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g03877 Tsu-Chr5 49826047 49826889 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu05g03877 144 277 B3 DNA Binding Superfamily AT1G05930 27.465 9.42e-07 47.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g03877 - - mtr:MTR_5g092880 195.667