Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g03862 atGGAAGGTAGTGAGGTGAAATTGGTGATCCAGAAGAAACTAACTGCGAGTGACGTGACCAAAAGCAAAAGCCGCTTCTCCATCCCAATAAAGAAGATGATTAAAGATTGTAAATTTTTGAGTTCAGAAGAGGAAATGTCTTTGGATTATGCGCGTCAAAAGAAAACAGACGGGAAGAAGCTTGATGGTATGTTAGTTTCCGTGTTGGATCCGAATCTTATGCTCCACGATGGTATTTGCTTCAAGAAGTGGAAAATGGAGAAGAATAATGAGATCTACAATCTCACAAAAAAATGGAACAATATCGTAGCAAAAAACGGTTTCAAAGAAAACGAAAAGGTGCAACTCTGGTCTTTCAGAAGTCATCAAAAGCTCTACTTTGCACTCATCAAGCTCTAG 399 0.3885 MEGSEVKLVIQKKLTASDVTKSKSRFSIPIKKMIKDCKFLSSEEEMSLDYARQKKTDGKKLDGMLVSVLDPNLMLHDGICFKKWKMEKNNEIYNLTKKWNNIVAKNGFKENEKVQLWSFRSHQKLYFALIKL 132
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g03862 132 SUPERFAMILY DNA-binding pseudobarrel domain 9 130 IPR015300 -
Tsu05g03862 132 PANTHER B3 DOMAIN PLANT PROTEIN-RELATED 1 132 IPR005508 GO:0003677
Tsu05g03862 132 Pfam B3 domain-containing protein At2g31720-like 3 104 IPR005508 GO:0003677
Tsu05g03862 132 Gene3D - 1 130 IPR015300 -
Tsu05g03862 132 PANTHER DOMAIN PROTEIN, PUTATIVE (DUF313)-RELATED 1 132 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g03862 Tsu-Chr5 49690650 49691048 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu05g03862 1 129 B3 DNA Binding Superfamily AT1G05930 27.692 2.34e-07 46.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g03862 - - mtr:MTR_5g092880 149.828