Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g03859 ATGGGTGCTTGTCTCAGTAAAAAAGAACCAGAACCACAACATAGACATGTTGGTGTTTCTGGTATGCATAATCACAATCATAATCTCAATCACAAGAATCGTGAACCCTATGTGAATCAATCAAAAGTCCCTTTTCAACAACCTTACCAATTACCTAACAAACAAGCTCCAAGGCCAAGACCTACTGTTAAAAGACCAGATACAAGCACAATCCTAGGTAAACAATTTGAAGATGTAAGAAAAATTTACACACTTGGGGAAGAATTAGGGAGAGGAAACTGTGGTGTGACTTATCTATGTACTGAGAAATCAACTGGTTTGAAATATGCTTGCAAGTCAATTTCAAAGAGCAAATTTATTAGTAAAGCCGAAAAAGAAGAGATAAAGAGGGAGATTCAAATCATGCAGCATATGAGTGGAAAACCAAATATTGTTGAGTTTAAAGGTGCTTATGAGGATAAAAATTCAGTTCATGTTGTTATGGAACTTTGCGCCGGTGGTGAACTTTTTGATAGGATTACTGCTAAGGGAAGCTATAGTGAAAGAGATGCAGCTTCAATTTGCAGACAAATTGTTAACATTGttcatatttgtcattttaagGGTGTGATGCATAGAGATTTGAAGCCTGAAAATCTCTTGTTGTCTAGTGAGGATGATAAGGCTACTATCATGGCCACTGATTTCGGCATGTCGGTTTTCATCGAAGAAGGAAAGGTATATACTGATATAGTTGGCAGTCCATATTACGTTGCACCAGAAGTTCTACGTCGGAAATATGGGAAGGAAATAGATATATGGAGTGCAGGGATTATTTTGTATATCTTACTTTGCGGCGTGCCTCCATTTTGGGCAGAGACGCAAAAGGAAATATTCGATGCTATATTGAAAGGTCATATTGACTTTGAAAGTCCTCCATGGCCAATCATATCAAACAGTGCTAAGGACCTTGTTCGTAAGATGCTTACACATGATCCAAAGCAACGCATTACTGCTTCTCAGGTTCTAGTTTCTATACTAATTGACTCTTATGTATTGTATGAATTATTAGAGCATCCATGGCTTAAACAAGGTGGAAATGATTCTGACAACTGA 1095 0.3708 MGACLSKKEPEPQHRHVGVSGMHNHNHNLNHKNREPYVNQSKVPFQQPYQLPNKQAPRPRPTVKRPDTSTILGKQFEDVRKIYTLGEELGRGNCGVTYLCTEKSTGLKYACKSISKSKFISKAEKEEIKREIQIMQHMSGKPNIVEFKGAYEDKNSVHVVMELCAGGELFDRITAKGSYSERDAASICRQIVNIVHICHFKGVMHRDLKPENLLLSSEDDKATIMATDFGMSVFIEEGKVYTDIVGSPYYVAPEVLRRKYGKEIDIWSAGIILYILLCGVPPFWAETQKEIFDAILKGHIDFESPPWPIISNSAKDLVRKMLTHDPKQRITASQVLVSILIDSYVLYELLEHPWLKQGGNDSDN 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g03859 364 Pfam Protein kinase domain 83 336 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu05g03859 364 SUPERFAMILY Protein kinase-like (PK-like) 83 357 IPR011009 -
Tsu05g03859 364 ProSiteProfiles Protein kinase domain profile. 83 355 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu05g03859 364 PANTHER CALCIUM-DEPENDENT PROTEIN KINASE 21-RELATED 43 363 - -
Tsu05g03859 364 MobiDBLite consensus disorder prediction 49 68 - -
Tsu05g03859 364 SMART serkin_6 83 345 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu05g03859 364 ProSitePatterns Serine/Threonine protein kinases active-site signature. 203 215 IPR008271 GO:0004672|GO:0006468
Tsu05g03859 364 CDD STKc_CAMK 83 354 - -
Tsu05g03859 364 Gene3D Transferase(Phosphotransferase) domain 1 170 364 - -
Tsu05g03859 364 MobiDBLite consensus disorder prediction 1 33 - -
Tsu05g03859 364 Gene3D Phosphorylase Kinase; domain 1 85 169 - -
Tsu05g03859 364 PANTHER SERINE/THREONINE-PROTEIN KINASE 43 363 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g03859 Tsu-Chr5 49671477 49673279 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu05g03859 1 363 EF-hand Containing Proteins AT1G50700 62.772 7.14e-162 460
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Tsu05g03859 Pkinase 1.9e-73 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g03859 K13412 - gmx:100794852 491.115